Panicum virgatum (switchgrass): 120654698
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Entry
120654698 CDS
T07260
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120654698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120654698
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120654698
Membrane trafficking [BR:
pvir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120654698
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120654698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
MMR_HSR1
EF-hand_1
EF-hand_7
GTP_EFTU
TsaE
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
120654698
NCBI-ProteinID:
XP_039788244
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All DBs
Position
1N:complement(4272401..4276994)
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AA seq
547 aa
AA seq
DB search
MEIARAAAGVACSKEHQRIYAEWFALADPDGDGRVTGADATSFFGMSGLSRADLKQVWAI
ADSKRQGYLGFAEFVTAMQLVSLAQAGNEITQDSLKREDLSTLDPPVMEGVDELVARSKA
VVNKVHPDDNGISQVQAPSMYHWFGSKSAQKNQIPLTAVTSVIDGLKRLYVEKLKPLEVA
YRFNDFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHVGPEPTTDRFVV
VMSGSDGRTIPGNTIAVQADMPFTGLTTFGGAFLSKFECSQMPHPLLEHITFVDTPGVLS
GEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLN
KADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPVNDSAVGPIGKDLFEREQ
DDLLCDLKDIPKKACDRRVNEFVKRARAAKIHAYIIGHLKKEMPAMMGKAKAQQRLIDNL
EDEFAKVQREYHLPAGDFPDVEHFKQVLGGYSIDKFEKLKPKMVQAVDDMLAYDIPELLK
NFRNPYE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcgcgagccgcggccggcgtggcctgctccaaggagcaccagaggatctac
gcggagtggtttgccctcgccgatccagatggagatggccgcgtcacgggcgccgacgcc
accagcttcttcggcatgtccgggctctcgcgcgccgatctcaagcaggtgtgggcgatt
gcggattccaagcggcaggggtacctgggattcgccgagttcgtcacagcaatgcagctc
gtgtctctggcccaagcggggaacgagatcacacaggacagtctcaaacgtgaagacctc
agcaccttggacccgcctgtgatggaaggtgtcgatgagctagttgctagatccaaggct
gttgtgaacaaagttcatccagatgacaatggtatctctcaggtccaagcaccttccatg
tatcactggtttggctcaaaatcagcacagaagaatcagatacctctgactgctgttacc
tctgtaattgatggcttgaaaagactgtatgtcgaaaaactgaagcctttggaggtcgca
tacagattcaacgattttgcttccccattattgacaagcagtgattttgatgcaaagcca
atggttatgctcttgggtcagtattctacagggaaaacaacattcattaagcatctgctg
aagacaagctacccaggagctcatgtcggaccagagccaactactgatagattcgtagtt
gtcatgtcaggatccgacggaaggaccattcctggcaatactattgctgttcaagccgac
atgccattcactggtcttacaacatttgggggagcatttttgtcaaagtttgaatgttct
cagatgccacatccgctactagagcatatcacctttgtagacactcctggagttctttct
ggtgaaaagcaacggacccaacgcagctatgatttcactggtgtcacttcgtggtttgct
gccaagtgtgaccttatccttcttctgtttgaccctcacaagcttgatataagtgatgaa
ttcaaacgcgtcatttcctcgttacgtggccatgatgacaaaatacgcgtagtgttgaac
aaggcagaccaagttgatactcagcagcttatgagagtgtatggtgcattgatgtggtct
cttggaaaagtgctaaatactcccgaggttgtgcgtgtgtatattgggtcattcaatgat
aaaccagtgaatgactcagctgtaggcccaattggaaaagatttgtttgagagggaacaa
gatgacctcctctgtgacctgaaagatattccgaagaaggcctgtgaccgccgagtcaac
gagtttgtcaagcgcgctcgggctgccaagattcatgcttacataattggccatctgaag
aaggagatgcccgcaatgatgggaaaagctaaggctcaacagcgactcatagacaacttg
gaagatgagtttgcaaaggtgcagagggaataccatctccccgccggagacttcccagac
gtggagcacttcaagcaggtgttgggtgggtacagcatcgacaagttcgagaagctcaag
cccaagatggtgcaggcggtagacgacatgctcgcgtacgacatcccggagctcctcaag
aacttcaggaacccctacgagtga
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