Panicum virgatum (switchgrass): 120654814
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Entry
120654814 CDS
T07260
Name
(RefSeq) SUN domain-containing protein 2-like
KO
K19347
SUN domain-containing protein 1/2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120654814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120654814
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
120654814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
Sec10_N
DUF3810
SHOCT
SOG2
CCDC90-like
JAKMIP_CC3
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
120654814
NCBI-ProteinID:
XP_039788408
LinkDB
All DBs
Position
1N:complement(5738983..5742925)
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AA seq
455 aa
AA seq
DB search
MSASTAAIPTASTNGNHALSLDSHSSQDVRRRTVVVAKKKASPELLAAGGVNGISEDKIT
SKKDLSHTIRGESVLDKPKYSSEARKDAVASAAAERRKKSSSKQEKAKWVTALSVLVKVC
LLISAIIWMGQLVWRWQNGELSFTTLDMESRLSKVEGFKKTTKMLQVQLDILDKKLGNEI
DKAKKDITKQFEAKGNELEKKVKTLEDKTGKLDKSISELRDMGFLSKKEFEEILSQLKGK
KGLGGTDNDITLDDIRLFAKDIVEIEIARHSADGLGMVDYALGSGGAKVVSHSKPFMNGK
NYMPGRSSVHATAQKMLEPSFGQPGECFALKGSSGFVDVKLRTGIIPEAVTIEHVDKSVA
YDRSSAPKDFQIRGWYQGTHDDSDKDSNVMATLGEFSYSLDGSNAQTFQLERTANPQAVN
MVRFDFSSNHGNLELTCIYRFRVHGTEPGSLSNAA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctccactgctgcaattccaaccgcaagcacaaatgggaaccatgcattaagt
ttggactcacattctagccaagatgttaggcggcgaaccgttgttgttgcaaagaagaaa
gcctcacctgagcttctcgctgcaggtggagtcaatgggatatcagaagataagattaca
agcaagaaggatcttagccatactatccgtggagaatcagttcttgacaagccaaagtat
tcatcagaggcaaggaaagatgcagttgcttcagctgctgctgaacgtcgaaagaaaagc
tctagtaaacaagaaaaggccaagtgggtaactgccttaagtgtgctggtgaaagtatgc
cttcttatttcagctatcatttggatggggcagttggtctggagatggcaaaatggtgaa
ttatcatttacaacactggatatggagagcaggctatccaaggtggaaggcttcaagaag
acaactaagatgcttcaggtacagctggacattttggataagaagctaggaaatgagatt
gacaaagcaaaaaaggatatcactaagcaatttgaggccaagggtaatgagttagagaaa
aaggtgaagacattggaagacaaaactggcaagttggataagtcaatatctgagcttagg
gacatgggatttctttctaagaaagaattcgaggagattttgagtcagttgaagggaaaa
aagggattgggtggtacagacaatgacataaccttggacgatatacggctatttgccaaa
gatattgttgagatcgagatagcaaggcattccgctgatggccttggtatggtggattat
gccctgggatctggcggtgccaaagtagtaagtcattcaaagcctttcatgaatggcaag
aactatatgcctggtcgcagcagtgtgcatgcaacagcccaaaagatgcttgagccaagc
tttgggcagccaggagagtgttttgcgctgaagggaagtagtgggtttgtggacgtgaag
ctaagaacaggaataattcctgaggcagtcactatagagcatgttgacaagagtgtggcc
tacgatagatctagtgctccaaaggatttccagatccgtggttggtaccaaggaacacat
gatgattcagacaaggattcaaatgtgatggctaccttaggagagttctcttatagcctc
gacggcagcaacgcccagaccttccaactggagagaaccgccaacccacaagctgtcaac
atggttcggtttgacttctcctcgaaccatgggaatttggaacttacatgcatctatcgc
ttcagggtgcatggtacagagcctggctccctcagcaatgcagcttga
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