Panicum virgatum (switchgrass): 120654856
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Entry
120654856 CDS
T07260
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03060
Protein export
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120654856
04141 Protein processing in endoplasmic reticulum
120654856
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120654856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120654856
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvir02044
]
120654856
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
120654856
Secretion system [BR:
pvir02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120654856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Motif
Other DBs
NCBI-GeneID:
120654856
NCBI-ProteinID:
XP_039788474
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All DBs
Position
1K:complement(36121604..36128784)
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AA seq
415 aa
AA seq
DB search
HYYWVRSTLASNRGMLMELGFRPITTAQMVMQLTTTSKLLHVDQNIHVNHELADGACKVL
AMATALKEAAAHILMGMYGPSLCSLGKVSIGNAVIVLLQILFSGIVVIYLDDILKKGYGL
LSSVSLFTATTICGNILWKAFSPLIFIYPEQGTEFEGAVPAWVHLLITRTDKFSAMREAF
YRQNLPNVTNLLATCLFVLIAISFQGLSTIVLPVRTHGVPRFQVNYLIKISNILYGPIIL
HRLLVSFLYSISKLLCMKYGGNKLLNLLGTWSRPDHFQQSFLVGGVLYYITTPPTLTDLH
RAPFHAFIYVVYVLGTCTYLSVFWLRVCASSKRFIDGFIVNEEQRMLAQPDSISWNEFYS
HVLKAARFGGFCLGALIILGDFMGVFGSGTEIMIAVTALYPYFDGRAGEVGPFGF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
cattactactgggtgcgctctaccctcgcctccaaccgtgggatgctcatggaactcggt
ttcaggcccatcaccacagctcagatggtgatgcagctcaccaccacttccaagctgctc
cacgtcgaccagaacatccatgtgaaccacgagctcgcagacggcgcgtgcaaggtgctc
gccatggccacagcgctcaaggaggccgccgcgcacatcctgatggggatgtacgggcca
agtctttgttcattgggcaaagttagcattggcaatgcagtgatagtcctccttcagatt
cttttttctggtatcgttgtcatttatcttgacgacatcctaaaaaagggatatggattg
ttatcgagcgtctcattgttcactgccacaactatttgtggaaatatattgtggaaagct
tttagtcccttgatatttatttatcctgaacaaggcactgaatttgagggagctgttcct
gcttgggttcaccttctgattactaggacagataaattttctgcaatgcgggaagcattt
taccgtcaaaacctcccaaatgttaccaacttactagctacttgcttgtttgttctaatt
gccatatccttccaaggtctgtcgaccattgtgttgccagtcaggacacatggtgttcct
aggtttcaagtcaactacctcatcaagatctccaatatactctatgggcctatcatcctg
catcgcttactggtttcatttctgtatagcatctcaaagctgttgtgcatgaaatatggt
ggaaataaactattgaatctgctcggcacatggagtagacctgaccattttcaacaatct
ttcctagttggtggggttttgtactacataacaacacccccgaccttgactgatctgcac
agagccccgttccatgcattcatatatgttgtctatgtgcttggtacttgtacgtatctc
tcagtattttggctgagagtttgtgcatcctcaaaaagatttatcgacggtttcattgta
aatgaggaacaaagaatgcttgcccagcctgactcgatatcttggaacgaattctacagc
catgttctgaaggcagctcggttcggtggcttttgtcttggggcattgataattttggga
gatttcatgggcgtgtttggttctgggactgaaattatgatagctgtaactgctttatat
ccttactttgatggtagagctggcgaggttggcccttttggcttctga
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