Panicum virgatum (switchgrass): 120654862
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Entry
120654862 CDS
T07260
Name
(RefSeq) chaperone protein ClpB3, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120654862
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP100
120654862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
AAA_7
IstB_IS21
AAA_18
AAA_24
NBD_SMAX1
Torsin
NACHT
AAA_25
TraD
Motif
Other DBs
NCBI-GeneID:
120654862
NCBI-ProteinID:
XP_039788479
LinkDB
All DBs
Position
1N:complement(6542114..6547830)
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AA seq
986 aa
AA seq
DB search
MARSAASRLVRAARAAAAATARRQGPGAGREVLPRALAPLAGDASASAAPATRRPAWFPA
PLGRFPVGAGLTVPPRRLFHSTAPAQYSAAGTSSSSQITPGEFTEMAWEGIVGAVDAARL
SKQQIVESEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDDFISRQPKVVGDTSGPII
GSSFVSILDSAKKHKKEYGDEFVSVEHILQAFTSDKRFGQQLFKDLKIAENDLKEAISAV
RGSQRVTDQNPEGKYQALEKYGIDLTESARRGKLDPVIGRDDEVRRCIQILCRRTKNNPV
IIGEPGVGKTAIAEGLAQRIVRGDVPEPLMNRRLISLDMGALLAGAKFRGDFEERLKAVL
KEVTASNGQIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYI
EKDAALERRFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVAAAVLSDRYITG
RFLPDKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKERLSK
LEAELEALKQKQKNLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKY
GTLLSLQKQLEEAENKLVEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSEREKL
LLLEDVLHKRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKTLA
EFLFNTENALIRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTESVRRRPYSVVLFDEI
EKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTTDSKEVV
YEIMKKQVIEMARQTFRPEFLNRIDEYIVFQPLDTSEINRIVEIQLNRVKSRLKQQKIHL
QYTPEAVELLGSLGFDPNYGARPVKRVIQQMVENEIALGVLKGDFKEDDTVLVDVSSAAI
AKGLAPKKKLVLQRVENRNEELVAND
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctccgccgcgtccaggctcgtgcgcgccgcccgcgcggccgcggcggccacc
gcccgccgccagggccccggcgctggccgcgaggtcctcccgcgggccctcgctccgctc
gcgggtgatgcctccgcctcggccgcccccgccacaaggaggccggcgtggttccctgcg
cctctggggcggtttcccgtcggggccgggctcacggtgccgccgcgccggctgttccac
tccacggcgcccgctcagtacagcgccgccggcacctcgtcctcgtctcagataacacca
ggagaattcactgaaatggcttgggagggcattgttggtgcagttgatgcagcaagatta
tcaaagcagcagatagtggagtcggagcacctgatgaaagctcttctggagcaaaaggat
ggattggcacgcaggatattttcaaaagctggaatagacaacacatcagttctacaagct
actgatgacttcatatctagacagccaaaggttgtcggtgatacgtctgggccaattata
gggtcaagttttgtttcaatattggatagcgcaaagaagcataaaaaagaatatggtgat
gagtttgtgtcagttgagcacatcctgcaagcattcacttcagataaaaggtttgggcag
cagctgtttaaagatctgaaaattgcggagaatgatcttaaagaagctatttcagcagta
cgtggaagccagcgagtcacagatcagaatccggaaggaaagtaccaggccctagagaag
tatggtattgacttgacagaatcagctcggcgtgggaaacttgatcctgttataggccgt
gatgatgaagtgcgcagatgcattcagattttatgcaggagaactaaaaacaatcctgta
attattggcgagccaggagttggcaaaactgctattgcggaaggattggctcagcgtatt
gtgcggggagatgttcctgaacctttgatgaatcgaaggcttatttcattggatatggga
gcacttcttgctggggctaaattccgtggtgattttgaggagagattaaaggctgttcta
aaggaggtcactgcttctaatgggcaaatcatcttgtttattgatgagatccatacagta
gttggtgcaggagccactggtggagcgatggatgctggtaacctgttgaagccaatgcta
ggccgtggagaactgcgctgcatcggagcaacaacattggatgagtacaggaagtacatt
gagaaggatgctgctctcgagcgtaggttccagcaggtttattgtggtgagccagcagtt
gaggataccatttccatactgcgtggcttgcgagagagatatgaactgcatcatggtgtt
aaaatatcagatggagctcttgttgctgcagcagttttatcagatcgttacatcactgga
cgttttttgccagacaaagccattgatctggttgacgaagcagctgctaagctcaaaatg
gagataacatctaaacctattgaattggatgaggtagacagagaaatcatcaggcttgaa
atggagaagctctcattgaagaatgacacggataaagcgtccaaagaacgactgagcaag
cttgaagctgaactagaagctctcaagcagaagcagaaaaacctttcggagcattgggaa
tacgagaagtccttgatgactcgtataagatcaattaaggaagagactgacagagtgaac
ctggagattgaagctgctgagagagaatatgatttgaatcgtgctgctgaactcaagtat
ggaacacttctgtcactgcagaaacaattggaagaggctgagaataaacttgttgaattc
cagcaatcagggaagtcaatgcttcgagaagaggtgactgatgttgacattgccgagatt
gttagcaaatggactggcattccagtgtcgaaccttcagcagtctgaaagagaaaagtta
ctgctgctggaagacgtgcttcacaagagggttattggccaagatattgcagtcaagtca
gtggctaatgccatccgtcgttctagagcaggcctatcagaccctaaccggccgatagca
agctttatgtttatgggacctacaggtgtaggaaagactgagctgggtaagacactggct
gaattcctcttcaacactgagaatgccctaatcaggattgatatgagcgagtacatggaa
aagcatgctgtctcccgtttggtcggggctccacctggatatgtcggttatgaggaaggg
gggcaattgactgaatctgttcgccgccggccttactctgttgttctcttcgacgaaatt
gagaaagcgcaccaggatgtcttcaacatcttgttgcagcttttggacgatggaagaata
acggattcacagggaaggactgtcagcttcacaaactgtgtcatcatcatgacctcaaac
attgggtcaccattgatcctggacacgcttagaaacaccacagacagcaaggaggttgtg
tatgagataatgaagaagcaggtgatcgagatggcccggcaaacattcagaccagaattc
ttgaacaggatagatgagtacattgtgttccaaccactagacacaagtgagatcaaccgc
attgtggagatccagctgaaccgggtcaagagccggctgaaacaacagaagatccatctt
caatatacaccagaggccgtggagcttctggggtctcttggctttgacccgaactacggt
gcaaggcctgtcaagagagtgattcagcagatggtggagaacgagattgcccttggtgtt
ctgaagggcgatttcaaggaagacgacactgtcctcgtggatgtgagttctgcagcaatc
gcaaaaggccttgctccaaagaagaaactggtcttgcagagggtagaaaacagaaacgaa
gagttagttgccaatgactag
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