Panicum virgatum (switchgrass): 120654921
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Entry
120654921 CDS
T07260
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120654921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120654921
04147 Exosome [BR:
pvir04147
]
120654921
04090 CD molecules [BR:
pvir04090
]
120654921
Enzymes [BR:
pvir01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120654921
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120654921
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120654921
CD molecules [BR:
pvir04090
]
Proteins
120654921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_21
AAA_16
Zeta_toxin
AAA_15
ABC_ATPase
DUF815
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
120654921
NCBI-ProteinID:
XP_039788534
LinkDB
All DBs
Position
1N:complement(7213419..7218474)
Genome browser
AA seq
1251 aa
AA seq
DB search
MGKDRPPETAETKAAPALRSFSSVFMHADGVDVALMVLGLMGAMGDGMSTPVMMLIASRI
FTDAGSGPGRLQQFRSKMNENARNLLILAAANWILAFLEGYCWTRTAERQSSRMRARYLS
AVLRQDVEYFDLKVGSTSEVITSVSSDSLAVQDALSEKVPNFVNNTARFLGSYAVGFALL
WRLTLVGLPSSLLLVVPGFLYGRTLISLARRIREQYTRPGAIAEQAMSSVRTVYSLVAEG
STVAQFSAALQESARLGIKQGVAKGVTLGSEGITFAIYAFNLWYGTRLIMSHSYKGGTVY
AASTSIIIGGSALGQGLSNIKYFAEATVAAERMLEVIRRVPKIDSESNAGEELARVAGEV
EFKDVEFCYPSRPDNPIFKSFSLRVPAGHTVALVGSSGSGKSTAIALLQRFYDPSAGQVT
LDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDATEEEVVAVAKAANADSF
ISQLPQGYHTQVGEHGVQMSGGQKQRIAIARAIIKLPKILLLDEATSALDTNSERVVQEA
LELASIGQTTIVIAHRLSTIQNANTIAVMQSGEVKELGTHDELIANENGLYSSLVHLQQT
KESMDSEEVDGRTRSTSLMQQSGSHGMSKRISIASGSIITPTLSLGNAEGNDNKTEPLKL
PVPSFIRLLMLNAPEWKQALMGSFSAIVAGGIKPVSGYAMGSMVSIYFLTDHEEMKDQTR
IYSLFFVGLALVSILLNIAQHYNFGVMGEYLTKRIREQMISKILTFEIGWFDSDRNSSGA
ICTQLAQDANVVRSLVGDRMSLVVQTASAVLIACIMSLEIAWRLALVMIIVQPLVIVCLY
APRTLLKSMSKKSLQAQSECSKLAVEAVANLRTVTAFSSQDRILHLFDKAQEGPRKENIR
QSWFAGLGLGTSMSILRCEWALTFWYGGILMAQHRLTSKALFQTLLILTTTGRVLADASS
MTTDLAKGADAVTSLFSIIDRETEIEPDNPEGYKPENLKGKVDIIEIDFAYPSRPDVIIF
KGFSLSIQPGKSTALVGQSGSGKSTIIGLIERFYDPLVGTIEIDGIDIKTYNLRALRKHI
GLVSQEPTLFAGTIRENIVYGSETAIEEEIVSAARNANAHDFITSLKDGYNTWCGERGVQ
LSGGQKQRIAIARAILKNPAILLLDEATSALDSHSEMVVQEALDRILVGRTSLVVAHRLS
TIQNCDVITVLEKGIVLETGTHASLMSKGSAGTYFGLVTMQQGRNQHVDFA
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggacaggccgccggagacggcggagaccaaggcagcgccggctctgcggtct
ttctcgtcagtgttcatgcacgcagacggtgtggacgttgcgctcatggtgctgggcctg
atgggcgccatgggcgacggcatgtcgacgccggtaatgatgctcatcgccagccgcata
ttcaccgacgctggcagcggccctggccggctccagcaatttcgttccaagatgaacgag
aacgcaaggaatctcctcatcttggcagccgccaactggatcttggcgttcctggagggg
tattgctggacgcggacggcggagcggcagtcgtcgcggatgcgggcgcggtacctgagc
gcggtgctccggcaggacgtggagtacttcgacctcaaggtcggctccacgtcggaggtg
atcaccagcgtctccagcgacagcctcgccgtgcaggacgcgctgagtgagaaggtgccc
aacttcgtgaacaacaccgccaggttcctcggcagctacgccgtcggcttcgcgctgttg
tggcggctcacgctggtggggctgccgtcctcgctgctgctcgtcgtccccggcttcctc
tacggccgcaccctcatcagcctcgcgcgccggatcagggagcagtacacgcgcccgggc
gccatcgccgagcaggccatgtcgtcggtgcgaaccgtgtactcgttggtggcggagggc
agcaccgtggcgcagttctccgccgcgctccaggagtcggcacggctcgggatcaagcag
ggggtcgccaagggagtcaccctcggcagcgaaggcatcaccttcgcgatctacgccttc
aacctctggtacggcacccgcctcatcatgtcccacagctacaagggcggcaccgtctac
gccgcctccaccagcatcatcatcggaggctcagcgctggggcaggggctgtcgaacatc
aagtacttcgcggaggcaaccgtggcagcggagaggatgctggaggtgatccggcgggtg
cccaagatcgactcggagagcaacgccggcgaggagctggccagggtcgccggcgaggtg
gaattcaaggacgtggagttctgctacccatcgcgacccgacaacccaatcttcaagagc
ttcagcctgcgcgtgccggcggggcacacggtggcacttgttgggagcagcgggtcaggg
aagtcgacggcgattgccttgctgcagcggttctacgatccatcggcggggcaggtgacc
ctggatggcgtcgacatccgtcgcctgcgcctcaagtggctgcgtgcgcagatggggctg
gtcagccaggagccggcgctgttcgcgacgtccattagggagaacatcttgttcggcaag
gaggacgcgacggaggaggaggtcgtcgccgtggcgaaggcggccaacgccgacagtttc
atctcccagctgccgcagggctaccatacgcaggtgggcgagcatggtgtccaaatgtcc
ggaggacagaagcaaaggattgctattgctagagcaatcataaagttacccaagatcctt
ctccttgatgaagccaccagtgcattggacactaattcagagcgtgttgtgcaggaggcg
cttgaactggcctccattggtcaaactactattgtcattgcccatcgcctatccaccatc
caaaacgcaaatacgattgcggtcatgcagtctggtgaggtcaaggagctgggaacccat
gatgagctcattgccaatgagaatggcctctactcatctcttgtccaccttcaacagacc
aaagagtcaatggattctgaagaggttgatggaagaactagaagtacatctcttatgcag
caatcaggcagccatggtatgagcaagaggatatccatagcaagcgggtcaatcataacg
ccaacgctatccctgggtaatgctgaaggtaatgacaacaaaaccgagccgctaaagctt
cctgtgccatccttcataaggctattgatgcttaatgcaccggagtggaagcaagcactt
atgggaagctttagtgcaattgtggctggaggcataaaacctgtgtctggatacgccatg
gggagcatggtctcaatctacttcctgacagatcatgaagagatgaaggatcaaacaaga
atctactcattgttctttgttggtcttgcattggtctcaatcctgcttaatattgcacaa
cattacaactttggtgtcatgggggaatacctcaccaaaaggataagagaacagatgatt
tcaaaaattctcacttttgagattgggtggttcgacagtgatagaaactctagtggtgcc
atatgcacccaacttgcccaggatgccaatgttgtgagatcgctcgttggtgatcgaatg
tcccttgtcgtccaaacagcttccgcagtgctcattgcctgcatcatgagtcttgaaatc
gcttggcgtttggcacttgtgatgattatagtgcaaccacttgtcattgtttgcctttat
gctcctcgtaccttactaaagagcatgtccaagaaatcattacaggcacaatctgaatgt
agcaagctagctgttgaggcagtcgctaatcttcgcactgtaactgctttctcatcccaa
gatcgcatcctacacctctttgacaaagcacaagaaggcccacgcaaggaaaatatcagg
cagtcctggtttgctggtctggggctcggtacctccatgagcattttgagatgcgagtgg
gccctcaccttttggtatggtggaatactcatggctcagcaccgccttacttccaaagcc
ctatttcaaaccctcttgattttgacaaccacaggacgtgtgctagcagatgcaagtagt
atgacaacagaccttgccaagggtgctgatgcagtcacttcacttttttctattattgac
agagagacagaaattgaacctgacaaccctgagggatacaaaccagagaatctcaaaggc
aaggtggacattatagaaattgattttgcgtatccatcaaggccagatgtgatcatcttc
aaaggattctccttgagcatccagccaggtaagtcaacagctcttgttgggcaaagtggg
tctggcaagtcaaccatcattgggcttatcgagcggttctatgatccccttgttgggact
atagagatcgatggcatagatatcaaaacatataacctacgagccctacgaaaacacatt
ggactggttagccaagaaccaacactttttgcaggtaccatcagagagaacattgtatat
ggcagtgaaacagccattgaggaagaaattgtgagtgcagcaaggaatgccaatgcacat
gatttcattactagcctcaaagatggatacaacacatggtgtggtgagagaggtgttcag
ttatcaggaggtcaaaagcagcgcattgcgattgcccgtgcaatcttaaagaaccctgct
atcttgctattggatgaagcaacaagtgcattggatagccactccgagatggtggtgcag
gaggcacttgacagaatattggtcggtaggactagtttagtggtcgcgcacaggctcagc
accatccaaaactgtgatgtgatcactgtgcttgagaaagggattgttctagagacaggc
acacatgcatccctcatgagcaagggttctgctggaacatactttggattggttaccatg
caacaaggacgcaatcaacatgtagattttgcatga
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integrated database retrieval system
