Panicum virgatum (switchgrass): 120654935
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Entry
120654935 CDS
T07260
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120654935
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120654935
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120654935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
FYRC
WSD
FYRN
Bromodomain
Phage_zn_bind_3
zf_RING-like
TMP_C
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
120654935
NCBI-ProteinID:
XP_039788548
LinkDB
All DBs
Position
1N:7394161..7418558
Genome browser
AA seq
2147 aa
AA seq
DB search
MDRPPHLDIDLNEAPSPPPSEPPTPRAPSPPRELAPPAYAAPPPPQPQLPPPPLLPLVAP
SPQQQLRLQQEALEVVLRFHRPPELRNTPFGPIGSVPAGLLPGLGLPLPAPHPGEAGWGY
PPPPCASCARQETLGKTFVCDACDRGFHSDCVRVWPPLLPLPPPPPPPPGPPGARRPRAA
TNEDWICPECEMRGARSTRWKLGSVPLDINAAPPEEPVAVPAHDISRTNISGGAQLSVAR
LPHFEGVRLNNTALYDGMQFMPQFDLAHSLGMRQKFASMDRDLNADENVPQRSIHLRRRR
DLPQTSTLPMVAENHEFGNPGIFMDPSFITKAMEQSTNENGSSLKPPKFLVEKSNHQPHH
CTVALPVQYSDFFITSLGEIDNRTSYHNSYQIWPVGFTSYWHDRVTGSLFECEVCDGGNF
GPLFKMRRLPCSPFQLPEASTTVCPNVVRKADTIETKESSVVVEDTANDTDDNISMLLSN
FSETNQDFMSCPSNNMEGKENLGCSNVQTLNMTVPAVLSDSGSFSWAPTKDANLHDKIGD
FTFEGTSPSSVWRMIYCAMMEACEKMYKEHGHLVLFCTHSSDKTSFDYGSGSQNIDSPCN
LLTRFCSSNGPKLPQFIEKENDVESTCALLKEWLYQDRIGLDLEFVQEIVESLPKSRACS
NYQFLCNRTGFNSSLTIASGVLLAVNKSSPSNEDVMSYGRHGSMVTGPQDHAQPSSFSIR
ELPPGNPFSRKLPPELAGDVFQVLEFLGRFAEIIGLKELPSVEQLEDELIDPWPICVNQK
DIQHHRDHTPPMNSPANVSTSYSNGESGVTTNEETASVFIPVETSSTSEAAQDKLAAETL
GRCSGVVLPEIHLALLKVLFTELVPRVAIFVDPRIDSKESKSKRGRKRDTDTLTRELKID
MLTANKLTWPELARRYIVAVSSLSGCMDSSDISSREGVKLFRCLQGDGGILCGALPGVVG
MEKDASLLAEAETLICHSSVNEGNKVFMMDYKDSDTVDSPEESACDTALPDWVKSLEPVR
KLPTNVGTRIRKCVYEALERKPPEWAREILEHSISKEVYKGNASGPTKKAVLSVLAEVCR
KKIPQNPEKPRKERNIISISEAILKKCRIVLRRAVSSDESKPFGNLLATTLTNSTENEDE
GILGFPGMVSRPLDFRTIDIRLAMGAYRGSLEAFLDDVQEVIHNLQTAFGDRPEVLVMVT
ALSQSFESLYKAEVQDLIKKFDKYLSNGNGNSEIHDELQDVLMAANNKLPKAPWEDGVCK
VCGIDRDDESVLLCDNCDSEYHTYCLNPPLARIPIGNWYCPSCLSGQKEPNVDHSTHVLM
QEQDKCVGEEARVLLERLNKLAMAMDEKEYWELSGPERIYLLKFLCDELLNTALIREHLD
QCSDKSNDLQQKLRHLNYELKELKYQLEIRTSYATQSRWIKNDHVSNSSGLVENQQRAMP
TASEHLEEAERVNVGVNLNTPAEGASAGQLNVSKPHSADNDISGTSVIERNKSLGLSKQT
SEMVIDRIDGGSIGEVSQSFEKSVGDINMGEAHSATVINAPNGELPDENARTPSQDNIEA
LTTKLADHDNLEALTTKLADHDNLEASTTKLADHDADNNETNNLLDRISQLQDSISTAEL
QLSMASLRRECLGRDCVGRLYWVTGRPGKRPRLVADGSMLIPKDRDISMVTSYPQSTFDS
RGWNSAAIVVYESDEEIKCLVDWLRDTDPREKDLKDSILQWQKSLYHQVSFPVSDPPVSN
SSKSEPLGDLPDTKAFIVLEQKYGLQLDQDTSELSKRRGRKTKLGSEERIYRCDCLEPVW
PSRHHCLTCHETYLTLAEYEGHNDGKCNSSNDSPNETKENDEPKLKGTKSDIKEKDPVDH
SCSAEPSNNGKLDPCPFDFEEICRKFITNYSNKETVKEIGLLGSNGVPSFVPSPAFFVDP
PALLSENKRKDDDVPNDWTSSLEECQAMSAKMSGQEVSQAAQDCPGNAGDAQMPKSKRPV
RDSTSAKEASSSTDKPTRLLTINGGLVPESSLMPVIGRNFHILKQLKINLLDVEAALPEE
ALRASKSQQIRRRSWRAFVKSAESISHVVLATNFLQSMIKAEFLKKDWWYWSSFTAAIKT
TTVTALALRIYTLDDCIMYRKDPAPNPEPADNARSGNKGKRKRDADS
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcccgccgcatctcgacatcgacctcaacgaggcgccgtccccgccgccgtcc
gagcccccgacgccgcgggccccatcgcccccgcgggagctcgctccgcccgcctacgcc
gcgcccccgcccccgcagccgcagctcccgcctccccctctgctgcctctggtcgcgccc
agcccgcagcagcagctgcggctccagcaggaggccctcgaggtggtgctgcggttccac
cggccgcccgagctgaggaacaccccgtttgggcccatagggagcgtgcccgccgggttg
ctccctggcctggggctgccgctgccggcgccgcaccctggggaggcgggctggggctac
ccacctcccccctgcgcgtcctgcgcccgccaggaaacgctggggaagaccttcgtgtgc
gacgcctgcgacagggggttccattccgactgcgtccgcgtctggccgcctctcctgccc
ctgcccccgcccccgcccccgccgcccggcccccctggcgcgcggcggccccgcgccgcg
accaacgaggactggatctgccccgagtgcgagatgcgtggcgctcgctccacccgctgg
aagctgggttccgtcccgcttgacatcaacgctgccccgccggaggaacccgtcgcagtc
cccgcccacgacatcagcaggacaaatatctctggtggagctcagctgagtgttgccaga
ttaccacattttgagggggtgcgcttgaacaatactgctctttatgatgggatgcagttt
atgccacaatttgatcttgctcattctcttggtatgagacagaaatttgcttccatggac
cgagatttaaatgctgatgaaaatgtaccacaaaggtcaattcatttacgcagaagaaga
gatcttccacaaacatcaacattacccatggttgctgagaaccatgagttcggaaatccc
ggcatttttatggatccatcctttattaccaaggcaatggaacaaagtactaatgaaaat
ggaagttcactaaagcctccaaaatttcttgtggagaaaagtaatcatcagccacatcat
tgtacagttgccctgcctgttcaatatagtgatttctttattaccagcttgggagaaatt
gacaatcggacaagctaccataattcgtaccagatatggccggttgggtttacttcttac
tggcatgatagagttactggttcactgtttgagtgtgaggtatgtgacggagggaatttt
ggacctttatttaagatgagaagattaccgtgttcgccgttccaacttccggaggcatca
actacagtgtgcccaaatgttgtgaggaaagctgatacaatagaaacaaaggaaagtagt
gttgttgttgaagatactgctaatgatactgatgataatatttccatgctcctatcgaat
ttctctgagacaaaccaagatttcatgtcatgtcccagtaacaatatggagggtaaagag
aatttagggtgcagtaatgtacaaacgttaaatatgacagtgccagctgtactgtcagat
tctggatctttcagttgggcaccgactaaagatgcaaatctgcatgacaaaattggtgac
ttcacatttgaaggaacatcaccttcctcagtctggaggatgatttattgtgctatgatg
gaagcttgtgaaaaaatgtacaaggaacatggccatttggtattgttctgcacacacagt
agtgacaaaacttcatttgactatgggagcggatctcagaacatcgacagtccttgcaat
ctactgactagattttgctcatcaaacgggcccaagctaccacaatttatagaaaaggag
aatgatgtggaatcaacttgtgcattacttaaagaatggttgtatcaggatagaattggg
ttagatttggaatttgttcaagaaattgtggaatctcttcctaaatccagggcttgttca
aactatcagttcttgtgtaacaggactggttttaactcttcactgacgattgctagtggc
gtgctgttagctgttaataaaagtagtccaagcaatgaggatgtcatgtcatatggtaga
catggatctatggtgactggaccacaggatcatgctcagcctagctcttttagcatccgt
gagcttcctccaggaaatccttttagccgcaagcttccaccagaattggcaggagatgtt
ttccaggtattggagtttcttggacgatttgctgaaattattggcctcaaagaacttcct
tcagttgagcaattagaagatgaacttattgacccatggccaatttgtgtaaatcaaaag
gacattcaacaccacagggatcatactccaccaatgaattcacccgcaaatgtttctaca
tcatattcaaatggtgaatcaggtgtaactactaatgaagaaacagcatctgtgtttatt
ccagttgaaacttcttcaacaagtgaagctgctcaagataagttggctgctgaaacactt
gggagatgtagtggtgtagtgttgcctgagattcaccttgcactcttgaaggttcttttt
actgagctagtgccgagagttgcaatttttgtggatccaagaattgattcgaaggaatca
aaatccaagcgtggaagaaagagggacactgatactctaacaagagaactaaagattgat
atgctaactgctaacaaattaacttggccagagttggctagaaggtatattgtagctgtt
tcttccctaagtggctgcatggattcgtctgatatttctagtcgagaaggagtgaagttg
ttccgctgcctccaaggtgatggtggtattctgtgtggagcactacctggggttgttggc
atggagaaggatgcatcgctgcttgcagaggctgaaacattgatatgccattcttcagtg
aatgaagggaataaggtctttatgatggattataaggatagtgatactgtagactcccct
gaggagtctgcgtgtgatactgcattaccagattgggtgaaatctctggagcctgtgaga
aaattgcctactaatgtaggaacaagaataagaaagtgtgtttatgaagctttggagagg
aaacctccagaatgggcaagggaaattttggagcattcaatcagtaaagaggtgtacaag
ggtaatgcatctggaccgaccaagaaagctgtcttgtctgtcttggcggaggtctgtcgt
aaaaaaataccccagaatccagaaaaaccaagaaaagagagaaatattatctccatctca
gaggctatattgaaaaagtgccgtattgtcctgcgacgtgctgtttcctccgatgaatca
aagccttttggcaatttacttgcaacaactctaacaaattccactgagaatgaggatgag
gggatccttggatttccgggtatggtatctcgccctttggatttccgcacaattgatata
aggttggctatgggagcttatcgtggatccttggaggcttttcttgatgatgtacaagaa
gtaatccataatctgcaaactgcatttggcgatcgacctgaagtgctggtaatggttaca
gcgctgtctcagagttttgagtcattgtataaggcagaggtacaagaccttattaaaaaa
tttgacaagtatctaagcaatggaaatggtaattctgaaatccatgacgaattacaagat
gttctcatggcagcaaacaacaagctgcccaaagctccatgggaggatggtgtctgcaaa
gtctgcggcatcgatcgagatgatgaaagtgtccttctgtgcgataattgtgactctgaa
taccacacttactgcctgaacccaccactggcacgcataccaattggaaactggtattgc
ccgtcatgtttgtcaggacaaaaggaaccgaatgttgatcacagtactcatgttttaatg
caagaacaagacaagtgtgttggggaggaagctcgtgttttgcttgagagactcaacaag
ttagctatggccatggacgagaaggagtactgggagcttagtggaccagagaggatatat
ttactgaaatttttatgtgatgaattgctcaacacagctctaatcagggaacacctagat
caatgttcggacaaatcaaatgatctccagcagaagttacgtcatctgaattatgaactg
aaagagttgaagtatcagttagaaataagaacttcatatgctacacaaagtagatggata
aaaaatgaccatgtaagcaatagttcaggactagtggagaatcagcagcgtgctatgccc
acagcatcagagcatcttgaagaggctgaacgggttaatgttggagttaacctgaacacc
cctgctgaaggggcttctgctgggcaattgaatgtgagtaaacctcacagtgctgacaat
gatatatccggtacatctgttattgaaaggaataaatctttgggactttcaaaacaaaca
tcagagatggttattgaccggattgatgggggctctattggtgaagtgtcccaaagtttt
gagaaatcagtaggtgacatcaatatgggagaggctcattctgctacagttatcaatgcc
ccaaatggagagttgcctgatgaaaatgctaggacaccatcccaagataacattgaagcg
ttgacgactaaattggccgaccatgataaccttgaagcgttgacaactaaattggccgac
catgataaccttgaagcgtcgacaactaagttggccgaccatgatgctgataacaatgaa
acaaataacttattggataggatttcacagttgcaggattcaattagcacagcagagtta
cagctcagtatggcatccttgagaagagagtgccttggaagggattgtgtgggtcgattg
tactgggttacaggaagacctggtaaacgtccgcgactggtcgctgatggaagcatgctg
atacccaaggacagagacattagcatggttaccagctatcctcagtctacatttgatagt
agaggctggaattcagcagcaattgttgtatatgaatctgatgaagaaatcaagtgtctt
gttgattggctaagggacactgatccaagggagaaggatctgaaagactctatcttgcag
tggcaaaagtctctttatcaccaggttagttttcctgtcagtgatcctccagtgtccaac
tcttcaaagagtgaaccacttggggaccttccagacaccaaggcttttatagttctggag
caaaagtatggcctgcaattggatcaagacactagtgaactatccaaaaggagaggaagg
aaaaccaagttgggttctgaagaaagaatatatcgctgtgactgtttagaacctgtatgg
ccttctcgacaccattgtttaacttgtcatgagacttatcttacattggcagaatatgaa
gggcataatgatggaaaatgcaacagcagtaatgactctcctaatgaaaccaaagaaaat
gatgagccaaaactgaagggtaccaagtctgatataaaggaaaaagatcctgtagatcat
agttgttctgctgagccatctaacaatggaaaattggatccatgcccttttgatttcgaa
gaaatttgtagaaagttcatcacaaattattcaaataaggagacggtgaaggagattggg
ctccttggatcaaatggagttccatcttttgtcccttcacctgcattttttgttgaccct
ccagctctgctaagtgaaaataaaagaaaggatgatgatgtcccaaatgattggacttcc
tctttggaggaatgccaggcaatgtccgccaaaatgtctgggcaagaggtatcccaagct
gctcaagattgtcctggcaatgcaggtgatgcgcagatgccaaaatctaaaaggcctgtt
agggattctacttcagccaaggaagcatcttcttcaacagacaaaccaacaagattacta
actatcaatgggggcttggttccagagtcatcattgatgcctgtgattggcaggaacttt
catatcctgaagcagctaaagataaacttgcttgatgtagaagcagctttgcccgaggaa
gcattgagagcctcgaagtctcaacaaataagaagacgttcatggcgtgcttttgtgaag
agtgcagaatcaatatctcatgtggtattggcaaccaacttcttgcagagcatgataaaa
gccgagttcctgaagaaagattggtggtactggtcctccttcacagcagctatcaagacg
acgaccgtaacagcgctcgcgctcaggatctacaccctcgatgactgcatcatgtacaga
aaagatccagctccaaaccctgagccagctgacaatgcaagatctggaaacaaggggaag
aggaagagagatgctgattcatga
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