Panicum virgatum (switchgrass): 120654994
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Entry
120654994 CDS
T07260
Name
(RefSeq) protein DNA-DAMAGE INDUCIBLE 1-like isoform X1
KO
K11885
DNA damage-inducible protein [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120654994
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120654994
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A28
120654994
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120654994
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Asp_protease
gag-asp_proteas
ubiquitin
Asp_protease_2
Rad60-SLD
UBA
Ddi2_HDD
RVP_2
RVP
UBA_7
Motif
Other DBs
NCBI-GeneID:
120654994
NCBI-ProteinID:
XP_039788641
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Position
1N:8121599..8126843
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AA seq
410 aa
AA seq
DB search
MKVTVMTTDEQILSLDVDPDESVENLKALLEVETRVPLRQQQLHFNGKEMQNSDKLSSIG
VHDGDLVMMLPSNERASQDVLKLNPDGTAANPQAFQQHVRGDSQLMAQLLQSDPQLAQAI
LGDNINELQNILRSRHLQKMELKRKQEEELALLYADPFDVEAQKKIEAAIRQKGIDENWE
AALEHNPEAFGRVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRFRG
VAVGVGQSEILGRIHVAPIKIGHLFYPCSFTVLDAPNMEFLFGLDMLRKHQCMIDLKDNV
LRVGGGEVSVPFLQEKDIPAHIRDEEKLSKLASSLGQATGESSKAREGTPDLPQQTPAGA
PVANPPQQAGDFEAKITKLIELGFDRASVVQALKLFNGNEEQAAAFLFGG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcacggtgatgaccaccgacgagcagattctctccctcgacgtagaccccgac
gaatccgtggagaatctaaaggcgcttctcgaggtggagactcgtgtaccgttgcgacag
cagcagcttcacttcaatgggaaggagatgcagaactccgacaagctcagctccattggg
gtccatgatggtgatcttgtcatgatgctcccctcgaacgaaagggcctctcaggatgtt
ctaaagttaaatcctgacggaactgctgctaatcctcaagcttttcaacaacatgttcga
ggtgattcacaacttatggcacagcttcttcagagtgatccgcaactagcacaagctatt
cttggagacaacatcaatgaactacagaatatactgcgctcccgccacctacagaaaatg
gaactgaaacgcaaacaagaagaagagcttgctttattgtatgctgatccttttgatgtc
gaagctcagaagaaaattgaagctgcaattcggcagaaaggcatcgatgaaaattgggag
gctgccctagagcacaatcctgaagcatttggtcgagtggtaatgctgtatgtggatatg
gaggtcaatggggtgcccttgaaggcctttgttgacagtggagcacagtcgaccatcata
tcaaaaagttgtgctgaacgttgcgggttgttgaggctacttgatcaacggttccgagga
gttgctgttggagttggtcaatcagagatactgggaagaatacatgtagctccaataaag
attgggcatctcttctatccttgttctttcactgtattggatgcccccaatatggaattc
ctatttgggctcgatatgctgcgaaaacatcagtgcatgattgacctaaaagacaatgtt
cttagagtgggaggtggtgaggtttcagtgcccttcttacaagagaaagacatccctgca
catatacgagatgaagagaaactatctaagctagcatcttctctcggccaagcaactgga
gaatcatcaaaggcacgtgaggggactcctgatttaccgcaacaaactcctgcaggagct
ccagttgcgaatcctccacagcaggcaggagatttcgaagcaaaaatcacgaagctcata
gaacttggattcgaccgagcatctgtagtacaagcactcaagctgtttaacgggaatgag
gagcaggctgctgccttcctctttggtggttag
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