Panicum virgatum (switchgrass): 120655015
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Entry
120655015 CDS
T07260
Name
(RefSeq) EIN3-binding F-box protein 2-like
KO
K14515
EIN3-binding F-box protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120655015
04075 Plant hormone signal transduction
120655015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120655015
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120655015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_RPS2
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
120655015
NCBI-ProteinID:
XP_039788668
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All DBs
Position
1N:complement(8434181..8437604)
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AA seq
649 aa
AA seq
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MPAFCAYGDGGCLVSSPAELSALFCRGGAVQQRKRALVAASAVAAAAAECVRAAKKQRQL
PLPLPSLDALPDECLFEILRRVPGGRGRGASACVSRRWLALLGSIRASEVAQAADTPALP
DLNEEFVMEEDEDEIPAVPCVERVLEGKEATDVRLAAMAVVAGSRGGLEKLAVRGSHPTR
GVTDQGLSAVAHGSPNLSSLALWDVPLVTDAGLAEVAAGCPSLECLDISRCPLITDKGLI
AVAQGCPKLMSLTIEACSGVGNEGLRAIGRCCTKLQAVNIKNCANVGDQGISSLVCSATA
SLAKIRLQGLNITDASLAVIGYYGKAVTDLTLARLATVGERGFWVMANAAGLQNLRCMNV
TSCPGITDLALSSIAKFCPSLKQLYLRKCAHVSDAGLTAFTESAKVFENLQLEECNRVTL
VGILSFLRNCSQKFRALSLVKCMGIKDIRSSPAQLPLCRSLRFLTIKDCPGFTDASLAVV
GMICPQLEQVDLSGLGEVTDCGLLPLIQSSEAGLIKVDLSGCKNITDGAVSSLVKAHGKS
LKKVSLEGCSKITDVSLFAISESCTELAELDLSNCMVSDYGVAILSSARHLKLRVLSLSG
CSNVTQKSVPYLGNLGQSLEGLNLQFCNMIGNHNVASLEKKLWWCDILA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgttctgcgcttacggagatggcgggtgcctcgtctcgtcgccggcggagctg
tccgcgctcttctgccgcggcggcgccgtgcagcagcggaagcgcgcgctggtggccgcg
tccgcggtcgccgcggcggccgcggagtgcgtgagggccgcaaagaagcagaggcagctg
ccgctgccgctgccgtcgctcgatgcgctccccgacgagtgcctcttcgagatcctgcgc
cgcgtgcccggcggccgcggacgcggcgcctccgcctgcgtctcccgccgctggctcgcg
ctcctcggcagcatccgggcctccgaggtcgcccaggccgcggacaccccggccctaccc
gaccttaacgaggagttcgtcatggaggaggacgaggacgagatccccgcggttccgtgc
gtcgagagggtgctcgagggcaaggaggccaccgacgtccgcctggctgccatggccgtc
gtcgccggatcccgtggcgggctggagaagctcgccgtccgcggcagccacccgacccgt
ggcgtcacggaccaggggctctcggcggttgcacacggcagccccaacctcagctcgctc
gccctctgggatgtgcctcttgtcactgatgcggggcttgcggaggtcgctgccgggtgc
ccctcgctggagtgtctggacatctctcgctgcccccttatcacagacaagggcctaatc
gccgtcgcccaggggtgccccaaattgatgtctctgaccatcgaggcatgctctggtgtg
ggcaacgagggcctcagggcgattggccgctgctgcaccaagctgcaggctgtgaacatc
aagaactgcgctaatgttggtgaccagggcatctccagcctggtgtgctctgctactgcc
tcgcttgccaagatccggctccaggggttgaacatcactgatgcttcgcttgctgtgatt
gggtactatgggaaggctgtcactgaccttacacttgctcgtcttgctactgttggtgag
aggggtttctgggtgatggctaatgcggctggcctgcagaatctcaggtgcatgaatgtt
acctcttgccctgggatcaccgatcttgctctctcttctattgccaagttctgcccgagc
ttgaagcagctttacctcaggaagtgcgctcatgtgtcagatgctggtcttactgctttc
acagaatcagcaaaggtgtttgagaacttgcagcttgaggaatgcaaccgggttactctt
gtcggtattctttctttccttcgcaactgcagccagaagttcagggctctctctttggtg
aaatgcatgggaatcaaggatatccgctcttcgcctgcacagcttcctctctgcagatca
cttcgtttcctgacaatcaaggattgcccagggttcactgatgcaagcttggctgtggtg
gggatgatttgccctcagttggagcaggtggacctgagtggtcttggtgaggtcactgac
tgtgggcttcttcctctgatccagtcttccgaagctggtctgatcaaggttgacttgagt
ggttgcaagaacatcacagatggtgctgtttcctccctggtgaaggcacatggaaaatct
ctgaagaaagttagccttgagggttgcagcaagataacagatgttagcctctttgccata
tctgagagctgcactgagcttgctgagcttgatctttcaaactgcatggttagtgactat
ggtgtggccatcctgtcatcagcaaggcacctcaagcttcgtgttctctcactgtctggc
tgctctaatgtcactcagaagagcgtgccatacttgggcaacctgggccagtctctagag
ggcctaaaccttcagttctgcaacatgattggcaaccacaacgttgcatcactggagaag
aagctctggtggtgtgacatccttgcttag
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