Panicum virgatum (switchgrass): 120655117
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Entry
120655117 CDS
T07260
Name
(RefSeq) elongation factor 1-gamma 2-like
KO
K03233
elongation factor 1-gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120655117
03012 Translation factors [BR:
pvir03012
]
120655117
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120655117
Translation factors [BR:
pvir03012
]
Eukaryotic type
Elongation factors
120655117
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Gene cluster
GFIT
Motif
Pfam:
EF1G
GST_N
GST_C
GST_N_2
GST_N_3
GST_C_2
GST_N_5
GST_C_3
Arc1p_N_like
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
120655117
NCBI-ProteinID:
XP_039788771
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Position
1N:10894345..10897660
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AA seq
416 aa
AA seq
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MALVLHAGSGNKNAFKALIAAEYSSIKVELVKDFQMGVSNKTPEFLKMNPIGKVPVLETP
DGPVFESNAIARYVTRLKDDNPLYGSSLIDYAHIEQWMDFAATEVDASIGKWLYPRMGFY
PYAAVSEETAIAALKRALGSLNTHLALNTFLVGHSVTLADIVLTCNLYLGFIRILTKSFT
SEFPHVERYFWTMVNQPNFKKVIGDVKQAEAVPPVPKKAAPAKEQKPKEAKKEAPKETLK
PKADEKPAEEEPKPKPKNPLDLLPPSKMILDDWKRLYSNTKTNFREVAIKGFWDMYDPEG
YSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVVGSEPPFKVKGLWLFR
GSEIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEALLDAKCFK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtactgcatgctggcagtggtaacaaaaatgcattcaaggctcttattgcc
gcggaatacagcagtatcaaggttgagttggtgaaggactttcaaatgggtgtctccaac
aaaacccctgagtttctcaagatgaaccccattgggaaggttcctgtcctcgagactcct
gatggtcctgtttttgagagcaatgcaattgcacgatatgttactcgcttgaaggatgac
aacccactttatggatcttcactgattgattatgcccacattgaacaatggatggacttt
gctgcaacagaggtcgatgctagcattgggaagtggctgtacccacgtatggggttttat
ccctatgctgctgtgagtgaggaaacagccattgcggctttgaagagagcattgggttcc
ctcaacactcaccttgcattaaacacatttcttgttgggcattcggtgactcttgcggat
atcgtgctgacatgcaacctctacttgggctttattcggatcttgaccaagagtttcacc
tcggagttccctcatgttgagaggtacttctggaccatggtcaatcagccaaacttcaag
aaagtcataggcgatgtgaagcaggcggaagctgtgccacctgttccaaagaaggctgca
ccagcgaaggagcagaagcctaaggaagccaaaaaggaggccccaaaagagaccctgaag
cctaaggcagatgagaaaccggcggaggaagaaccaaagcctaagccaaagaatcctctt
gatttgctccctccaagcaagatgatccttgatgattggaagaggctgtactccaacaca
aaaaccaacttccgcgaggttgctatcaaaggtttctgggatatgtatgacccagagggc
tactccctgtggttctgtgattacaagtacaatgatgagaacaccgtgtcttttgtaacc
atgaacaaggttggtgggttcctgcagcggatggacctgtgccgcaaatatgcttttgga
aaaatgcttgtggttggctctgagccacctttcaaggtcaaggggctctggctattccgt
ggctcagagatcccaaagtttgtcatggatgaggtctacgacatggagctttatgagtgg
accaaggttgacctctccgatgaggcccagaaggagcgtgtcaatgccatgattgaggac
caggagcccttcgaaggcgaggctttgctggatgcgaaatgcttcaagtga
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