Panicum virgatum (switchgrass): 120655242
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Entry
120655242 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxylase 1
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01200
Carbon metabolism
Module
pvir_M00168
CAM (Crassulacean acid metabolism), dark
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pvir_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pvir_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120655242
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120655242
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
120655242
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-GeneID:
120655242
NCBI-ProteinID:
XP_039788923
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Position
1N:13845016..13851594
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AA seq
965 aa
AA seq
DB search
MAGKAPMERHQSIDAQLRLLAPGKVSEDDKLVEYDALLVDRFLDILQDLHGPHLREFVQE
CYELSAEYENDRDEARLGELGRKLTSLPPGDSIVVASSFSHMLNLANLAEEVQIAHRRRI
KLKRGDFADEASAPTESDIEETLKRLVSQLGKSREEVFDALKNQTVDLVFTAHPTQSVRR
SLLQKHGRIRNCLRQLYAKDITADDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAG
MSYFHETIWKGVPKFLRRIDTALKNIGINERLPYNAPLIQFSSWMGGDRDGNPRVTPEVT
RDVCLLARMMAANLYFSQIEDLMFELSMWRCSDELRIRADELHRSSKRAAKHYIEFWKQV
PPNEPYRVILGDVRDKLYYTRERSRHLLTTGISEIPEDATFTNVEQFLEPLELCYRSLCA
CGDKPIADGSLLDFLRQVSTFGLALVKLDIRQESDRHTDVLDSITTHLGIGSYAEWSEEK
RQDWLLSELRGKRPLFGSDLPLTEETADVLGTFHVLAELPADCFGAYIISMATAPSDVLA
VELLQRECHVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYMNRINGKQEVMIGYSDSG
KDAGRLSAAWQMYKAQEELIKVAKHYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIH
GSLRVTVQGEVIEHSFGEEHLCFRTLQRYTAATLEHGMHPPISPKPEWRALMDEMAVVAT
KEYRSIVFQEPRFVEYFRSATPETEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTR
FHLPVWLGFGAAFKHIMQKDIRNIHTLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAAVYD
KLLVAEDLQSFGEQLRKNYEETKELLLQVAGHKDVLEGDPYLKQRLRLRESYITTLNVCQ
AYTLKRIRDPAFQVSPQPALSKEFVDESLPAQLVQLNPESEYAPGLEDTLILTMKGIAAG
MQNTG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaaggcgccgatggagcggcaccagtcgatcgacgcgcagctgcggctgctg
gcgccaggcaaggtgtccgaggacgacaagctggtcgagtacgacgccctcctcgtcgac
cgcttcctcgacatcctccaggacctgcacggcccgcacctccgcgaattcgtccaggag
tgctacgagctctcagcggagtacgagaacgaccgcgacgaggcgcggctcggcgagctc
gggagaaagctcaccagcctgccgccgggggactccatcgtcgtcgccagctccttctcg
cacatgcttaacctcgccaacctcgccgaggaggtgcagatcgcgcaccgccgccggatc
aagctcaagcgtggggacttcgccgacgaggcctcggcgcccaccgagtccgacatcgag
gagacgctcaagcgcctcgtctcgcagctcggcaagtcgcgcgaggaggtcttcgacgcg
ctcaagaaccagactgtcgacctcgtcttcacggcgcaccccacgcagtccgtcaggagg
tccctgcttcagaagcacggcaggatccggaattgcctgagacagctgtatgccaaggac
atcactgctgacgacaagcaggagcttgatgaggctcttcagagggagattcaagctgct
ttcagaactgatgaaatccgcaggacccctcccacccctcaagatgaaatgcgtgctgga
atgagttacttccatgaaactatatggaagggcgtacccaaattcttgcgccgtattgac
actgctctgaaaaatattgggatcaatgagcgtctcccttacaacgctcccctcattcag
ttctcatcctggatgggtggtgaccgtgatggaaatccaagagttacaccagaggttaca
cgggatgtatgcttgttggcgagaatgatggctgctaacttgtacttctctcagatagaa
gatctaatgtttgagctctctatgtggcgctgcagtgatgaacttcggatccgtgcagat
gaattacatcgctcgtcaaaaagagctgcaaagcattatatagaattctggaagcaagtt
cctccaaacgaaccatatcgtgtcatacttggtgatgtcagggataaattgtactataca
cgtgagcgttctcgtcatttattgacaacaggaatttctgagattccagaggacgcaact
tttactaatgttgaacagtttctggaacctcttgagctttgttatagatcattatgtgct
tgtggtgacaagcctatagctgatggaagtctccttgatttcttgcgtcaagtatccact
tttgggcttgctcttgtgaaacttgacatcaggcaggaatctgatcggcacactgatgtc
cttgattcaataactacacatcttggaattggatcctacgctgaatggtctgaggagaaa
cgccaggattggctgttgtctgaactgaggggcaaacgtccattgtttggttctgatctt
cctctgactgaagagactgctgatgttttaggcacatttcatgtccttgcagagctccca
gcagattgttttggcgcatatatcatctcgatggcaactgccccatctgatgtgcttgct
gtcgagcttttacagcgtgagtgccatgtgaaacagccattgagagttgttccactcttt
gagaaacttgcagatcttgaagcagctccagcagctgtagcacgactcttttcaattgac
tggtacatgaataggattaatggcaagcaggaggtgatgattgggtactcagactctggc
aaagacgctggacgtctctctgcagcgtggcaaatgtataaagcacaagaggagctcatc
aaggtggcaaagcattatggagtgaagttgaccatgtttcatggaaggggtggaacagtt
ggcagaggaggtggccccactcatctggccattttatcgcagccaccagacacgatacac
ggatcgcttcgtgtaacagtacaaggtgaggttattgagcactcctttggagaggagcac
ttgtgctttagaactttgcaacgctacactgcagctacccttgaacatggcatgcatcct
ccaatttcccccaaacctgaatggcgtgctctgatggacgaaatggctgtcgtggcaacc
aaagaatatcgatcaattgtcttccaagaaccacgctttgttgaatacttcagatcggct
acacctgagactgaatatggtaggatgaatatcggtagccgtccatcgaagaggaagcct
agtgggggaatagaatcgctccgtgcaattccatggatctttgcttggacacagacaagg
ttccatctccctgtttggcttgggtttggcgcagcattcaagcatatcatgcagaaggac
atcaggaacatccatactctgaaagaaatgtacaatgagtggccattcttcagagtcacc
cttgacttgcttgagatggttttcgccaagggagacccaggaatcgcagctgtgtacgac
aaactgctagtggctgaagatctgcaatcctttggggagcagctgaggaagaactatgag
gagacaaaagagctactccttcaggttgccggtcacaaggacgtcctcgaaggcgatcct
tacctgaagcagcgtctgcggctgcgtgagtcctacatcaccaccttgaacgtctgccag
gcctacaccctgaagcgaattcgtgacccggccttccaagtgagcccccagccggctctg
tccaaggagtttgttgacgagagcctgccagcgcagttggtgcagctgaaccccgagagc
gagtacgctccgggcctggaggacacgctgatcctgaccatgaagggcatcgccgccgga
atgcagaacaccggctag
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