Panicum virgatum (switchgrass): 120655254
Help
Entry
120655254 CDS
T07260
Name
(RefSeq) putative callose synthase 8 isoform X1
KO
K11000
callose synthase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120655254
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120655254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glucan_synthase
FKS1_dom1
CALS1
Vta1
Motif
Other DBs
NCBI-GeneID:
120655254
NCBI-ProteinID:
XP_039788936
LinkDB
All DBs
Position
1N:14002019..14053155
Genome browser
AA seq
1990 aa
AA seq
DB search
MELEIVEVGPSSRPLRYVPRRLEPWHAPPPPPPPPPPPPPHHQQQQHGGAGDAGEPAAPV
AQQFDSEKLPQTLVSEIRPFLRAANQVEAENPRVAYLCRFHAFEKAHTMDRLSTGRGVRQ
FKTTLLQRLEQDERSTKSKMTQRSDAREMKLFYEKKKQANAHELLPVLAEVLKALLSGTG
LENLVAGEDFTDKSGLLRYNILPLHPKFSQRPIMLLPEVRVAFSAVFNVRSLPSANMKDD
KTHTDILRWLQSWFGFQTGNVANQREHLILLLANMHARLNPKPSSAQMLDDRVVEELLAK
TFENYLTWCKFLGRKSNIWLPSVKQEIQQHKLLYIALYLLIWGEASNLRLMPECLCYIFH
HMSYELYGVLSGAVSLITGEKVRPAYGGEDESFLKNVVKPIYDVIFQEAQKNKNGASDHS
TWRNYDDLNEFFWSTDCFKLGWPMRPDNDFFFISDETKNSQILCASRLSRVPQGIESCAS
CIPLVSVDTSHQNEQQNSQLPHESSSTENYLNSGAEQRQQQTTSSRSQQRWLGKTNFVEV
RSFWHLFRSFDRMWTVLVLGLQVLIIMAWQGLGSPTQLLDPIIFEDILSIFITNAVLRVI
QVILDIAFSWRTKQTMRSDQILRFTLKLSLAVAWAIILPIFYASSQNYRACSAKRSKAFL
GMFCLSKYMVVVALYLTSNVIGMALFFVPAVTNYIETSTWRICSMLSWWSQPQLYVGRGM
QEGLVPLLKYTTFWMILLSSKFLFSYYFEIKPLVGPTKEIMKINVNKYEWHEFFPQVKSN
AGAILAVWAPIILVYFMDTQIWYSVFCTIFGGMCGIIHHLGEIRTMGMVRSRFCTLPEAF
NMSLVPPAMPKEKKRMFPSFLEKKIFKKLGKAERIDPTKFALVWNQIINSFRSEDIISNR
EMELMTMPMSLEHSSGSIRWPLFLLAKKFSEAVDMAANFTGQSAQLFLKIKKDSYMFCSI
NDFYELTKTIFRFLIIGETEKGVVAAIFGKIEESIQNSSLLTDFKMDHLPSLFSKFDRLT
ELLYLNKQEHRYEVTILLQDIVDILIQDMIVDAQSILDVVNSPERLISDDDGAFGYYEPE
LFASVSSITNIRYPFLDGQLSQQKEQVKRLYLLLNTKEQVAEIPSNLEARRRISFFATSL
FMDMPAAPKVRSMLSFSIITPYFMEEVKFSDEELYSNQDESSILSYMQKIYPDEWKNFSE
RIGPKATNDEIRYWASYRGQTLSRTVRGMMYYKKALRLQAFLDRTSDQESYKGLLATEQG
KNKRNIHQSLSAEIEALADMKFSYIISCQKFGEQKIKGDPHAQDIIDLMTRYSALRVAYI
EEKEVIENNVPHKVYSSVLIKAENNLDQEIYRIKLPGPPIIGEGKPENQNHAIIFTRGEA
LQTIDMNQDNYLEEAYKMRNVLQEFVIHPRDQAPTILGLREHIFTGSVSSLAGFMSYQET
SFVTIGQRFLADPLRVRFHYGHPDIFDRIFHLTRGGVSKASKTINLSEDVFAGYNSILRH
GNITYNEYIQVGKGRDVGLNQISKFEAKVANGNSEQTISRDIHRLGRRFDFFRMLSCYFT
TVGFYFNSLISVVGVYVFLYGQLYLVLSGLQRALLHDAQTQNIKSLETALASQSFLQLGL
LTGLPMVMELGLEKGFRTALSDFILMQLQLASVFFTFSLGTKAHYYGRTILHGGAKYRPT
GRKFVVFHASFTENYQLYSRSHFVKGFELVFLLIVYHIFRRSYVSSVVHVMITYSTWFMA
VTWLFTPFLFNPAGFAWQKIVEDWADWNRWMRNQGGIGVQPEKSWESWWNAENAHIRHSV
LSSRILEVLLSLRFFIYQYGLVYHLNISQDNKNFLVYLLSWVVIIAIIGLVKLVNCASRR
LSTNHQLIFRVIKLLIFLTVVTSLILLYCLCQLSILDLIICCLAFIPTGWGLLLIVQVLR
PKIEYYAIWEPIQVIAHAYDYGMGSLLFSPIAVLAWMPVISAIQTRVLFNRAFSRQLQIQ
PFIVGKTKRR
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgagatcgtcgaggtgggcccgtccagccgcccgctgcgctacgtcccgcgc
cggctggagccgtggcacgcgccgcctcctccccctcctccgcctccgccgccgccgccg
caccaccagcagcagcagcatgggggagccggggacgcgggggagcccgcggcgccggtg
gcgcagcagttcgacagcgagaagctcccgcagacgctcgtctccgagatccgccccttc
ctgcgcgccgccaaccaggtcgaggccgagaacccgcgcgttgcctacctgtgtcgtttc
cacgcgtttgaaaaggctcatacgatggatcgactttctacagggaggggtgttaggcaa
tttaaaaccacacttcttcagagacttgagcaggatgagagaagcaccaaatcaaagatg
acacaaagaagtgatgcccgagagatgaaattattctatgagaagaaaaagcaagccaat
gcacatgagctcttgcctgtcctggcagaagtgctgaaggctcttctcagtgggactggc
ctggagaaccttgttgctggtgaagattttacagacaaatcaggattattacgatataac
attcttccactccatcctaaatttagtcaaagaccaattatgcttctcccagaggtcaga
gttgctttctcagcggtatttaatgttcgcagtcttccatcagcgaacatgaaagatgac
aaaacacatacagatattcttagatggctgcaaagttggtttggattccagacaggaaat
gtcgccaaccaaagggagcatttaattctattgcttgcaaatatgcacgctcgattaaat
cccaagccatcctctgctcaaatgcttgatgacagggtagtagaagaattgttggcaaaa
acatttgagaactatctgacctggtgcaagtttttggggcgaaaaagcaacatatggttg
ccctctgtgaagcaggaaattcagcaacataagcttctgtacatagccctttatctcctc
atatggggagaagcatcaaatttaagactgatgccagaatgcttatgctacatttttcac
catatgtcatatgagctatatggagtgctctctggagctgtaagcttaattactggggaa
aaagtccgacctgcctatggaggagaggacgaatcatttcttaaaaatgtagtgaaacca
atatacgatgttatatttcaggaagcacaaaagaacaagaatggagcatctgatcactca
acatggcgaaactatgatgacctcaatgaattcttttggtctactgattgctttaagctt
ggttggcccatgcgccctgacaatgatttcttttttatatcagatgagactaagaactct
cagattctttgtgcatcaagattatcaagggtgccacaaggcattgaaagttgtgctagc
tgtattccactagtgtctgtagacacatcacaccaaaatgagcagcaaaattcccaactg
cctcatgagtcatcatccacagaaaactatcttaattcaggagccgaacaaagacaacag
caaactacaagttccagatctcaacaaaggtggttgggaaagacgaattttgttgaggtc
cgttccttttggcatctcttcagaagctttgataggatgtggacagttcttgtgcttggg
cttcaggttctgataattatggcatggcaaggcttagggagtcctactcagttacttgat
ccaataatttttgaggatattctgagtattttcattaccaatgcagtacttcgagttatc
caagttatccttgacattgctttctcatggagaaccaagcaaacaatgagatccgatcag
atcctacgatttactttaaaactttctcttgcggtggcatgggcaatcattcttcctata
ttttatgccagttctcaaaattatagggcttgttcagctaaacgatctaaagcctttctg
ggaatgttctgcttgtcaaaatatatggtggttgttgcattgtaccttacaagcaatgtg
atcgggatggcgttattttttgtcccagctgtcaccaactacatagagacatctacttgg
cgaatttgcagtatgttgtcatggtggtctcagccacaattgtatgttggacgaggaatg
caagaaggactagtacctttactgaagtacacaactttttggatgattctcttgtcaagt
aaatttttattcagctactactttgagattaagcctcttgtaggacctacgaaagaaatt
atgaagatcaacgtgaacaaatatgagtggcatgagttcttcccacaagtcaagagtaat
gctggcgctattcttgctgtatgggcccctataattcttgtctatttcatggacacacag
atatggtattctgtattctgtactattttcggtggtatgtgtggtattatccatcatctt
ggggagattcgcacaatgggaatggtgagaagtcggttttgtaccttacctgaagccttc
aatatgtctcttgttcctccagcaatgccaaaagagaaaaaaagaatgtttcctagtttt
ttggagaagaaaatattcaagaaattaggtaaagctgaaagaatcgacccgacgaagttt
gctttggtttggaaccagataataaatagcttccgttcagaggacataataagcaataga
gagatggaattgatgacgatgcccatgtcactagagcatagttctggttccattcgttgg
ccattgtttttacttgctaaaaagttttcagaagcagtggacatggcagcaaattttact
ggacaaagtgctcaactgttcttgaaaattaagaaggatagctacatgttttgctctatc
aatgatttctacgaattgacaaaaactatttttagatttctcattattggcgaaacagag
aagggggtggtagctgcaatatttggtaaaatagaagagagtattcagaactcaagcctg
ctgactgattttaagatggatcatttgccttcattgttcagcaaatttgatcggttgact
gaacttctgtatctaaacaaacaagaacatcgatatgaggtgacaattctgcttcaagat
attgttgatattctaatccaagatatgattgtggatgctcaaagtatattggatgtggtt
aattctcccgagagactgatctctgatgatgatggcgcgttcggatactatgaaccagag
ctctttgcatcagtcagctcaataacaaacatccgatatccgtttcttgatggtcagcta
agtcagcaaaaggaacaggttaaacgcctctaccttttgcttaatacaaaagaacaggtt
gcagaaataccatcaaatttagaggctaggcgacgcatttcattcttcgccacatctctg
tttatggatatgcctgctgctcccaaagttcgcagtatgttatcgttcagcataataact
ccatatttcatggaagaagtgaagttttctgatgaagaactttattcgaatcaagatgaa
tcgtccatcctttcctacatgcaaaagatatatccagatgaatggaaaaacttttcggaa
cgcattggtccaaaggctacaaatgatgaaattagatactgggcttcctaccgtggccaa
acactgagccgaactgttcggggaatgatgtactacaaaaaggcattgagactacaggct
ttcttagacaggacaagtgatcaagaatcatacaaaggacttttggcaactgagcaagga
aaaaataaaagaaacatccaccaatcattatcagctgaaattgaagcacttgcagatatg
aaattttcatatatcatttcatgtcagaagtttggggaacagaaaatcaaaggtgatccc
catgctcaagacattatagatctgatgaccaggtactctgctctacgggtcgcttatatt
gaagagaaggaagtcatagaaaataacgttcctcacaaggtttattcctctgtgttaata
aaagcagaaaataatttggaccaggagatttaccgtataaagctgcctggtccgcccatc
attggagaagggaagcctgaaaatcagaaccatgccattatcttcactcgtggagaagct
ctacaaacaattgatatgaatcaagacaactatctggaagaagcttacaaaatgaggaat
gtccttcaagagtttgtaatacatcctagggaccaagctccaaccatacttgggcttaga
gagcatatcttcactggaagtgtttcatctcttgctggcttcatgtcatatcaagagaca
agctttgtcacaattggacagagatttcttgctgatccccttagggtacgatttcactat
ggccatccagacatttttgatcggatatttcatttaacaagaggtggtgtaagtaaagca
tctaaaactataaacttaagtgaggatgtatttgctgggtataattccatattgcgtcat
ggaaatataacttacaacgagtacattcaagttggcaaagggcgtgatgttggtctaaat
cagatttcaaaatttgaagctaaagtggcaaatggcaacagtgaacaaacaataagtcgt
gatattcaccggctcggtcggcgatttgatttcttcaggatgctttcatgctattttacg
acagtgggattttacttcaacagcctaatatcagttgttggggtttatgttttcctctat
gggcaattatacttggttctcagcggcctgcagagggctctgttacatgatgcccagact
cagaatataaaatccttggaaacagcccttgcatctcagtcttttctccagctgggactt
cttacaggattgcctatggtgatggaactaggtctggaaaagggtttccgtacagctctg
agtgattttatcctcatgcaattgcagttggcttcagttttcttcacgttctctcttgga
acaaaagcacactattatggccgtactattctccatgggggtgctaaataccggcccaca
gggcgtaaatttgtagttttccatgcaagctttacggaaaactatcagttgtattccagg
agtcactttgtcaaaggatttgagttggtcttccttttgatagtctaccacatctttagg
agatcttatgtgagcagtgtggtgcacgtgatgatcacatactcaacgtggtttatggca
gtgacttggctgtttactccttttctctttaacccagctggttttgcttggcaaaaaatt
gttgaggactgggctgactggaacaggtggatgaggaatcaagggggcataggagtgcaa
ccagaaaagagttgggagtcatggtggaacgctgagaatgcacatatacggcactcagtg
ttgagttctagaattcttgaagtgctgctctcgctacgcttctttatatatcagtacgga
cttgtctatcacctgaatatatctcaagacaacaagaatttccttgtctatttgctttcg
tgggttgtcataattgccattattggattggttaagcttgtaaattgtgctagccgtcgg
ctgagcacgaatcaccaactcatcttcagggtcataaaacttttgatattcctgacggtg
gttacttccttaattcttctctattgtctctgccaattatccatcctggatttgatcatc
tgttgtctcgcattcataccaactggttggggtcttctccttattgttcaagttctgcga
ccaaaaatagagtactatgcgatatgggagcctattcaggtcatagctcacgcttacgac
tatggaatgggatctctgctcttctccccaattgctgtgctcgcatggatgcctgttatc
tctgccatccaaactcgggttcttttcaacagagcattttcccggcaactacagatccaa
ccttttattgtaggcaaaactaaaaggagatag
DBGET
integrated database retrieval system
