Panicum virgatum (switchgrass): 120655481
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Entry
120655481 CDS
T07260
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120655481
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP100
120655481
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Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
Hydin_ADK
Motif
Other DBs
NCBI-GeneID:
120655481
NCBI-ProteinID:
XP_039789251
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Position
1N:complement(20382622..20393147)
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AA seq
579 aa
AA seq
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MSAAVRSRAAAAALSAARRIHAGRAAGQKQQGGGDGPGALRRPWTLFRRQQQQEHGRLPR
AAAAAPDAAADRGAGGSDDGEPPEIWRQPGEAPGERAAAGTVGRIDVVRVAVPGGGDGFD
GKDGAGETAGWGGSNLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESL
SSRSAGDCSESDSCTSDTDMVELEKSNILVMGPTGSGFLSISSRSGTFEIFLNTSGKTLL
AKTLARFVSVPFVIADATTLTQAGYVGEDVESILYKLLAAADFDVAAAQQGIVYIDEVDK
ITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVPEKGARRHPRGDNIQIDTKNILFICG
GAFVDLEKTISERRHNSSIGFRAQVRSNMRTGGVINAEITSSLLESVESGDLIAYGLIPE
FVGRFPILVSLSSLSEDQLVEVLTEPKNALGRQYTKLFEMNDVKLHFTEKALWLIAKRAI
AKNTGARGLRSILESILTEAMYEIPETRSGKDKIDAVVVEESVGSANQHGIGAKILCGEG
ALDLYLAKHDNKESEFQQPEKSNRESEIDAEAPSRVASM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgccgtccgctcccgcgccgcggcggcggcgctctccgccgcgcgccgtatc
cacgcgggccgcgccgcggggcagaagcagcagggcggcggcgacggccccggcgcgctc
cgccgcccgtggaccctcttccggcgccagcagcagcaggagcacggccgcctcccccgt
gccgccgccgctgccccggacgccgccgccgaccgcggggccggtgggtcggacgacggg
gagccgccggagatctggcgccagccaggggaggcccccggggagcgcgcggccgcgggc
accgtggggaggatcgacgtggttagggttgcggttcccggcggcggggatggttttgac
gggaaagacggtgccggggagaccgcggggtggggtgggtctaacctcggccggcggttc
cccacgcccaaggagatttgccgtggcctcgataagtttgtcatcggccagcagcgggcc
aagaaggtgttgtcagtagcagtttataatcactataaaaggatatattgtgaatcactc
tccagcaggtctgctggagattgtagcgagagcgattcgtgcacaagcgacactgacatg
gtagagcttgagaaaagcaacatccttgtcatgggtcctacgggctcgggatttctgagc
atatcaagtaggagtggtacattcgagatttttctgaacacgtcagggaaaacattgctg
gcaaaaacactagcaagatttgtgagcgtgccctttgttatagctgatgcaacaaccctc
actcaggctggatatgttggtgaggatgttgaatctattttgtataagctcctagcggct
gctgattttgacgtagctgctgctcagcaagggatcgtctacattgatgaagttgataaa
ataacgaagaaggctgaaagtatcaatcttagcagagatgtttcaggtgaaggtgttcaa
caagcactgttaaaaatgcttgagggaacggttgttagtgttcctgagaaaggggccaga
aggcatccaaggggtgacaatatccagattgatacaaaaaacattctattcatttgcggt
ggtgcttttgtagacttggagaaaactatttcggaaaggagacacaattcttcaattggt
ttccgagcgcaggttcgttcaaatatgcgaactggtggtgtcatcaatgctgagatcaca
tcttctctactggaatcagttgaaagtggtgatctcattgcgtatggattaattccggag
tttgttggtagatttccaattcttgttagtctgtcctctctcagtgaagatcaacttgtt
gaggttctcacagagcccaagaatgcccttggaaggcagtataccaagttgtttgaaatg
aatgatgtcaaattgcatttcacggagaaggctttatggcttattgccaaaagagcaata
gcaaagaatactggggctcgaggtttaaggtccatattagaaagtatattgactgaagca
atgtatgagattccagagacacgaagtggaaaagacaaaatagatgctgtggttgttgag
gagtctgttggatcagcaaatcaacatgggattggagctaagattctttgtggcgaagga
gcattggatctctatctggccaagcatgataataaagaatcagagttccaacagccggag
aaatcaaaccgggaatctgagatcgatgcagaagccccctctagagtggccagcatgtag
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