Panicum virgatum (switchgrass): 120655502
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Entry
120655502 CDS
T07260
Name
(RefSeq) cysteine desulfurase 1, chloroplastic-like
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00450
Selenocompound metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120655502
Enzymes [BR:
pvir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
120655502
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
120655502
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120655502
NCBI-ProteinID:
XP_039789286
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Position
1N:complement(21097324..21112830)
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AA seq
454 aa
AA seq
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MAAAASFRCCFPGSAIGGGFIRPSSSRRGRHAAAVVAPPPPASLGNRTRVDFPILHQEFD
GAKLVYFDNGATSQKPYSVMKTLDEYYRSYNSNVHRGIHALSAKATDAYEGARTKVANFV
NAADSREIVFTRNATEAINLVAYSWGLSNIKQGDEILLTVAEHHSAIVPWQFVSQKTGAT
LKYVGLTKEEVPDIEQLKGLLSNKTKIVVVHHVSNVLGSMLPIEEIVTWSKGVGAKVLVD
ACQSVPHMPVDVQKLGADFLVASSHKMCGPTGVGFMHGTFEILSSMEPFLGGGEMIADVF
NDKSTYAEPPSRFEAGTPAIGEAIGLGAAIDYLSCIGMDQIHEYEKELATYLYESLISVP
NVRVYGPAPSQTDHRAPLCSFNVENVHPTDIAEILDLQHGVAIRSGHHCAQILHRTLGIN
ASARASLHFYNTKEEVDAFIDALKDTIHFLTSQH
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgtcgttccgctgctgcttccccggctccgctatcggtggcggcttc
atcaggccctcctcctccaggcggggccgacacgcagcggccgtggtggcgccgccgcct
cccgcttcgctggggaaccgaacacgcgttgacttccctatcctccaccaggaatttgat
ggtgccaaattagtttatttcgacaatggtgcaacctcacagaaaccttatagtgtaatg
aaaacattagatgagtactacagatcgtacaactcgaatgttcatcgtggtattcatgca
ctcagcgcgaaagctactgatgcatatgagggtgcaagaacaaaagttgcaaattttgtc
aatgcagctgatagcagagagattgttttcacacgtaatgctacagaagctatcaatttg
gtagcctattcatggggtctatctaacataaaacaaggagatgagattcttcttactgtt
gcggagcatcatagtgctattgttccatggcaatttgtttcccagaagactggtgccact
ttaaagtatgttgggttgactaaagaagaggttccagacattgagcagttaaaagggctt
ctgtcaaacaaaacaaagatagttgttgtccatcatgtctcaaatgtacttggttcaatg
cttcctattgaggagattgtaacatggtcaaaaggagttggagctaaggttcttgtagat
gcttgtcaaagtgttcctcatatgccagttgatgttcagaaacttggtgccgactttctt
gtagcatcctcacataagatgtgtggccctacaggagttggatttatgcatggcacattt
gagatcttgtcatctatggagcctttcttaggtggtggtgaaatgattgcagatgtgttc
aatgacaaatctacatatgctgagcctccctctagatttgaggctggaactcctgcaatt
ggagaagctataggattgggagcagcaattgactatctatcatgcattggcatggatcag
atccatgaatatgagaaagagttggcaacatatctctatgaaagccttatttcagttcca
aatgtccgggtatatggtccagcaccttcccaaacagatcaccgtgctcctttatgctct
ttcaatgttgagaatgttcatcctacagatattgcagaaattcttgatctccagcatggc
gtagcaattcgatcagggcatcattgtgcacagattttgcataggacccttggtatcaat
gcaagtgctcgtgcaagtcttcacttttacaatacaaaagaggaggtggatgctttcatc
gatgcactgaaagatactattcacttccttacttctcaacactag
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