Panicum virgatum (switchgrass): 120655524
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Entry
120655524 CDS
T07260
Name
(RefSeq) AUGMIN subunit 6-like isoform X1
KO
K16589
HAUS augmin-like complex subunit 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120655524
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Augmin complex
120655524
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Gene cluster
GFIT
Motif
Pfam:
HAUS6_N
DASH_Dad2
DUF6612
Motif
Other DBs
NCBI-GeneID:
120655524
NCBI-ProteinID:
XP_039789307
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Position
1N:23555503..23564443
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AA seq
712 aa
AA seq
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MATDREKEREAELESAMYTNCLLLGLDPAVLGSPSSAVARVGLFRHSNPRLGEQLLYFLL
SSLRGPAQSAKDFDKVWPIFDSAQSREFRKIVQGIISELEQQGALPRSNSRVSSLATCCG
PRFVELLWQLSVHALREVHRRTFAADVASNPLPAALTDVSYLHAAALLPVTKARIALERR
KFLKNANIAVQRQTTWSNLAHEMTAEFRSLCAEEAYLQQELEKLQDMRNKAKLEGDLWDE
RLSSSSGQNSHLVSKATRLWESILARKGQHEVLASGPIEDLIAHREHRYQISGSQLLAAM
DMSLSAPHSELLSARAGETSPILDKQEQISLLFQGKEEALSRPDDRNGRGQQTVDVAEIL
RRWTHALQRIHKQSLHLAKANDGEGPELLRSASDGETSTHADSLTATLAEHRQHLVSIQG
LINQLKEAIPAMQHSIEELSEEVNSVSNSMDLLNSRLPLSASLGRSEQENSKEVSEITSK
LSSTHLDKPGGSPALKLPSLFSLTPSSGKGTQTQKRNALIRQPSQEVTSEEKTLNVPSNK
DQVNGSEHENDGYIAHDIRRSVREAALSKPLRNTDRPQDKNSDNGSEHFFIPLSAGAARK
EMDAATNRRKQRPGLSSPQMKFPKSTSDLCYNADSPINASPVLLSEMNGHDPVSAMSFLD
PVSGLAHQSFISDDALDQVFSPPLLLESTLFNDADEDLLAPLSEMDAALMEH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatcgggagaaggagcgcgaggcggagctagagagcgccatgtacaccaac
tgcctcctcctcggcctcgatcccgccgtcctcggctccccctcctccgccgtcgcccgc
gtcggcctcttccgccactccaacccgcgcctcggcgagcagctcctctacttcctcctc
tcctcgcttcgcggccccgcgcagtccgctaaggacttcgacaaggtctggccaatcttc
gactctgctcagtccagggagttcaggaagatcgttcaagggataattagcgagctggag
cagcagggggcgctgccgaggagcaattccagggtctcgtcacttgctacttgctgcggc
cccagatttgttgagcttttgtggcaactctctgtgcatgccttgagagaagttcacagg
agaacttttgcagctgatgttgcatcaaatccacttcctgcagcactaacagatgtttct
tatcttcatgccgctgctttactccctgtgaccaaggcaaggatagctctggagaggcgt
aaatttctgaaaaatgcaaacatagctgtccaaaggcaaacaacatggtcaaatttggcc
catgaaatgacagctgagttccgaagtctatgtgctgaagaggcttatttgcagcaagag
ttagagaaactacaagatatgagaaacaaagcaaaacttgaaggtgacctgtgggatgaa
cggctctcaagctcatctgggcagaattctcatttggtttctaaggcaactcgtctttgg
gaatcgatattggctcgcaaaggtcaacatgaggttttagcttctggaccaattgaagat
cttatagcacatagggagcacagataccagatatctggatctcagttattagcagccatg
gatatgagtttaagtgctccgcattctgagttattatcagctcgagctggtgaaacttct
cccattttggacaagcaagaacagatttctctgctattccaaggaaaggaagaagccctt
tcaaggccagatgataggaacggacgtggtcaacaaactgttgatgtagctgaaattctc
cgccgttggactcatgctttacagcgtattcataaacagtctcttcatttggccaaagca
aatgacggagaggggccagaattactgaggagtgcatctgatggagagaccagtactcat
gctgactctttaactgcaacgttagctgaacatcgccagcatttagtcagtatccagggt
ctaattaatcaactaaaggaagctattccagccatgcagcattcaatagaagaactctca
gaagaagtgaacagtgtcagtaactcaatggatcttttgaattccagactgccgctttct
gccagccttggaagatcagaacaggaaaacagcaaggaagtttcagagattacttctaag
ctctcttctacacacctggacaagcctgggggcagtcctgctctaaagctaccttcatta
tttagcctaactccaagttctggaaaaggaacacagacgcaaaaacggaatgctctaata
cgccaacctagccaggaggtcacatcagaagagaaaacacttaatgtcccctcaaataaa
gatcaagtgaatggctcagagcatgaaaatgatggctatattgctcatgatattagacgg
tctgttcgtgaagctgctctgtcaaagccattgaggaatacagataggccacaagataaa
aatagtgacaatggttcagagcacttcttcattccgctgtcagcaggtgctgcaaggaag
gagatggatgcagcaacaaatcgacggaaacaaagaccaggtttatcgtcacctcagatg
aagttcccaaagagcactagtgacctttgctacaacgcagacagcccaataaacgcaagt
ccagttctgttaagtgaaatgaacggacatgatcctgtcagcgccatgagctttcttgac
ccggtcagtggtctggcacatcagtcatttatcagtgatgatgctcttgatcaagtgttc
tcccctcctctgttgttggaatctacgttgttcaatgatgcagatgaggacctgcttgca
ccactgtcagagatggatgcagcattaatggaacattag
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