Panicum virgatum (switchgrass): 120655541
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Entry
120655541 CDS
T07260
Name
(RefSeq) putative SNAP25 homologous protein SNAP30
KO
K18211
synaptosomal-associated protein 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120655541
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
120655541
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF7799
BRE1
Motif
Other DBs
NCBI-GeneID:
120655541
NCBI-ProteinID:
XP_039789337
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Position
1N:26038232..26041341
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AA seq
384 aa
AA seq
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MAASAIPRLGPWFYRFPCSVYSLSRSTRLHQRGYIIFACSHCYIASALRPSGTANSFLFL
VRSSSWPIPTSGSRDLADFVQGRQFPRKLTAFPSVSMSGKRSFFASKKKATNPFDSDSDD
GDKKQQRPAQASSVPPPAEQRVSLFGAGAGGQERGGLLSSLEAPRNSHYRNDFRDAGGLE
SQSVQELEGYATYKAEETTRRAQGCVTIAEEMRDTASKTLVTVHQQGQQIHRTHMMAVDI
DQDLSRSEKLLGDLGGLFSKKWKPKKNGTIKGPMLSRDDSFIRRGSHLEQRQKLGLVGQP
RSDVREFHSEPTSALEKVEMEKAKQDEALSDLSDILTELKGMAVDMGSEIERQTKAMGDA
EKDYDELNFRVKGANTRARHLLGR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgcgatcccgcgactgggtccttggttttaccgctttccttgctccgtt
tattccctctcccgttctactcgcttgcatcaacgtggatatattatcttcgcgtgctcc
cattgttatattgcctccgccctccgcccctccggcaccgcgaactccttcctcttcctg
gtgcgctccagttcttggccgatccccaccagcggatcccgcgatcttgctgacttcgtc
cagggacggcagtttccgcgaaaattgactgccttcccgtcagtcagcatgagcgggaag
cgatccttcttcgcatccaagaagaaggccaccaatcctttcgattccgactccgacgac
ggcgataagaagcagcagcggccggcgcaggcctcctccgtgccgcccccggccgaacag
cgtgtctccctcttcggcgccggcgccggcggccaagaaaggggcgggctcttatcctcc
ttggaggcgccgaggaacagccactaccgaaacgacttccgcgacgctggcggcctggag
agccagtcagttcaggagctggaggggtacgcgacgtacaaggccgaggagaccacgcgc
cgggctcagggatgcgtcacaatagccgaggagatgagggataccgcgtccaagaccctc
gtcaccgtccaccagcaggggcagcagatccaccgcacgcacatgatggccgtcgacatc
gaccaggacctttccaggagtgagaagctattgggtgatcttgggggcctattttccaag
aagtggaagccaaagaaaaatggcacaatcaagggtcctatgctaagtagagatgattcc
ttcataagaaggggcagccatttggagcaaaggcagaaattagggctggtcggtcagcct
cgatcggatgtgcgtgaatttcattctgaaccaacatcagcacttgagaaagttgagatg
gagaaagcaaagcaggatgaggctctgtctgatctaagcgacatactgaccgagctgaaa
gggatggccgttgacatgggctctgaaattgagaggcaaacaaaggcaatgggagatgca
gaaaaggattacgacgagctgaacttccgggttaagggagcaaacactcgagctcgccat
ctacttggcagataa
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