Panicum virgatum (switchgrass): 120655663
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Entry
120655663 CDS
T07260
Name
(RefSeq) U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120655663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120655663
Spliceosome [BR:
pvir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120655663
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
120655663
NCBI-ProteinID:
XP_039789540
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Position
1N:complement(34331773..34335214)
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AA seq
203 aa
AA seq
DB search
MSDRRRDKEKPRDRDREKDRDLDRHRDRDRDRDRNRDRDRDRDRDRDRDRDRDRRRDRER
KRSRSLSPSADRDRSHLRHSHSHRHRGRSSPSPDAGRHKRRRDASPTAADHHREDKKSAD
PLAPPKDGGDPAAVVAVGDGDVDAEELEMMKMMGIPVGFDSTKGKHVPDADVSGVRVVTK
RQPRQYMNRRGGFNRPLPPERNR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccgccgccgcgacaaggagaagcctcgcgaccgcgaccgtgaaaaggaccgc
gacctcgaccgccatcgtgaccgggatcgcgatagggacaggaatcgggatcgggaccgg
gatagggatagggatagggatcgcgatcgggaccgcgaccgccgccgcgaccgcgagcgg
aagcgctcccggtccctctccccgtcagcagaccgggaccgctcccacctccgccactcc
cactcgcaccgccaccgaggccgctcgtccccctcccctgacgccggtcgccacaagcgc
cgccgcgacgcgtcccccaccgccgccgaccaccacagggaggacaagaagtccgccgat
cctctcgcgccacccaaggacggaggggaccctgcggcggtcgtagcggtgggcgacggg
gacgtggatgcggaggagctcgagatgatgaagatgatgggcatccccgtcgggttcgac
tccaccaaggggaagcacgtgcccgacgccgacgtcagcggcgtgcgcgtcgtcaccaag
cgccagccgcgccagtacatgaatcgccgcggtgggttcaaccggcccctgccgccggag
cggaaccgctga
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