Panicum virgatum (switchgrass): 120655753
Help
Entry
120655753 CDS
T07260
Name
(RefSeq) probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
KO
K09667
protein O-GlcNAc transferase [EC:
2.4.1.255
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00514
Other types of O-glycan biosynthesis
pvir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120655753
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120655753
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120655753
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120655753
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.255 protein O-GlcNAc transferase
120655753
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked GlcNAc type
120655753
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120655753
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120655753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_41
TPR_1
TPR_11
TPR_2
TPR_8
TPR_17
TPR_16
TPR_7
TPR_12
TPR_19
TPR_14
TPR_10
TPR_9
TPR_6
TPR_CcmH_CycH
NatA_aux_su
TPR_MalT
TPR_NPHP3
TPR-S
ARM_TT21_5th
ARM_TT21_C
FAT
BTAD
ARM_TT21_N
RPN7
EST1_DNA_bind
TPR_EMC2
TPR_21
ANAPC3
ARM_TT21
DUF7017
SNAP
Motif
Other DBs
NCBI-GeneID:
120655753
NCBI-ProteinID:
XP_039789650
LinkDB
All DBs
Position
1N:complement(37497874..37508108)
Genome browser
AA seq
1009 aa
AA seq
DB search
MLSLQQQQQHGGAVAVGDARHHAPQPAVLGGGGGDWLGFVGRADLEEPARNAPSPATFLL
PPAPLDDRAAQPEPKPGQLAGAVDEQRHLALAHQNYRSGKYREALEHGNVVYEKNPRRTD
NLLLLGAIYYQIRNYDMCIAKNEEALAIDPHFAECYGNMANAWKEKGDIDLAIRYYLTAI
QLRPNFCDAWSNLASAYTRKGRLNEAAQCCRQALAINPRLVDAHSNLGNLMKAQGFIQDA
YSCYIEALRIDPHFAIAWSNLAGLFMEAGDLDKALMYYKEAVKLKPSFADAYLNQGNVYK
ALGMPQDAIVCYQRALHARPDYAMAYGNLATIYYEQGQLDMAIRCYNQAIVCDPQFVEAY
NNMGNALKDAGRVEEAINCYRSCLALQANHPQALTNLGNIYMEWNLISAAASFYKAAISV
TSGLSSPLNNLAVIYKQQGNYADAITCYTEVLRIDPTAADALVNRGNTFKEIGRVNEAIQ
DYIQAARIRPNMAEAHANLASAYKDSGHVETAIISYKQALQLRPDFPEATCNLLHTLQCV
CDWENRDAMFRDVEEIIRRQIKMSVLPSVQPFHAIAYPIDPMLALEISRKYAAHCSLIAS
RFGLPPFVHPPPVPVKAEGKHCRLRVGYVSSDFGNHPLSHLMGSVFGMHDRDNIEVFCYA
LSQNDGTEWRQRIQSEAEHFVDVSAMTSDMIARLINQDKIQILINLNGYTKGARNEIFAL
QPAPIQVSYMGFPGTTGAAYIDYLVTDEFVSPSCYAHIYSEKLVHLPHCYFVNDYKQKNQ
DCLTPVCPHKRSDYGLPEDKFIFACFNQLYKMDPEIFDTWCNILKRVPNSALWLLRFPAA
GETRVRSHAAARGVRPDQIIFTDVAMKNEHIRRSQLADLFLDTPLCNAHTTGTDILWAGL
PMITLPLEKMATRVAGSLCVATGLGEEMIVSSMKEYEDRAVELALNPAKLQSLTNKLKEV
RMSCPLFDTARWVRNLERAYYKMWNLYCSGRHPEPFKVEEDDKEFPFDR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgctgcagcagcagcagcagcacggcggcgccgtcgccgtcggcgacgcgcgc
caccacgcgccgcagccggcggtgctcggcggcggcggcggggattggctagggttcgtg
ggccgcgcggacctggaggagcccgcgaggaatgccccgtcgcccgccacgttcctgctg
ccgcccgcgccgctcgacgacagggcggcccagcccgagcccaagcccggccagctcgca
ggagctgttgacgaacagcggcatttggcacttgctcatcagaactacaggtcagggaag
tacagagaggccttagagcatggcaatgttgtttacgagaagaacccacgtcgaactgat
aacctcctcctccttggagctatctattatcagatccgtaattatgacatgtgcattgca
aaaaatgaggaggctcttgccatagatccacactttgctgaatgctatggcaatatggcg
aatgcttggaaggagaaaggcgatattgatctcgcaattcgttactatcttactgccatt
cagctgcgaccaaacttctgtgatgcgtggtcaaatcttgctagtgcgtatacacggaag
gggagattgaatgaagcagctcaatgctgtagacaagcacttgccataaaccctagattg
gttgatgcacacagcaatcttgggaatctgatgaaagctcaaggtttcattcaagatgca
tatagttgttacatcgaggcattacgcatagatcctcactttgcaatcgcatggtcaaat
cttgctggtctgtttatggaggcaggagacctagacaaagctttaatgtattacaaggaa
gctgttaaacttaagccatcctttgcagatgcatatcttaaccaagggaatgtttataag
gctttgggaatgcctcaagatgccattgtgtgttatcaacgtgcactgcacgcacggcct
gactatgctatggcttatggtaatcttgctactatttactatgagcaaggccagcttgat
atggcaattcgttgttacaatcaagctatagtctgcgatccacagtttgtcgaagcatac
aacaacatgggaaatgcacttaaagatgctggacgagtggaagaagcaatcaactgctac
agatcatgccttgcgttgcaagcaaaccacccgcaagccctgacaaacttaggaaacata
tatatggagtggaacctgataagcgctgctgcttcattttacaaagcagctatatctgtc
acatctggattatcttccccacttaacaacttggctgtgatatacaagcaacagggaaac
tatgctgatgctatcacatgttacactgaagttcttcgtatagatcctacagcagctgat
gcactagttaatagagggaatacattcaaggagattggtagagttaatgaagcaattcag
gattatattcaggctgcacggatcagaccgaatatggcagaagcccatgccaacttggcc
tcagcttacaaggatagtgggcacgtagagacagctataattagctacaaacaggctcta
cagctgcgccctgattttcctgaggcaacctgcaatcttcttcataccttacagtgtgtc
tgtgactgggaaaacagggatgccatgttccgtgatgttgaggaaattataagaaggcaa
ataaagatgtcagtacttccaagtgtgcaaccttttcatgcaattgcttatcctatcgat
ccaatgcttgcgctggaaataagccgtaagtatgcagctcattgttccttgattgcttct
cgttttgggctgccgccttttgtgcatccaccacccgttcctgtaaaagcggagggtaaa
cattgtcgactcagggtgggatatgtgagtagtgatttcggaaatcatcccctatcccat
ctcatgggttcagtatttggaatgcacgatcgtgacaatatcgaggttttttgctatgca
ctgagtcaaaacgatggcactgagtggaggcagcgtattcagtctgaggcagagcatttt
gttgatgtctctgccatgacctctgatatgattgccagacttatcaatcaagacaagata
cagatattgatcaatcttaatggctacacaaagggagccaggaatgaaatttttgcattg
caaccagctccaatccaagtttcatacatggggttccctggcacaacgggtgctgcatac
atagactacctggtcacggatgagtttgtttctccaagttgctatgcacatatatattca
gaaaagctcgtccatttgcctcattgctattttgtcaatgactacaagcagaaaaatcaa
gactgtcttactccggtatgcccgcataaaagatctgattatggattacctgaggataaa
tttatttttgcatgtttcaatcaactttataagatggatcctgaaatatttgatacatgg
tgcaatattctgaaacgtgttcccaacagcgcattatggcttttaaggttcccagcagct
ggggaaactagagtaagatcacatgctgctgccagaggagtaagaccagatcaaatcata
ttcacagacgttgccatgaaaaatgagcatatacgacgcagtcaactggcagaccttttc
ctggatacccccctatgcaatgcccacacaactggcactgacatactgtgggctggtttg
ccaatgatcactcttccgctggagaagatggcaaccagagtagccggttccctctgtgta
gctactgggctcggggaagagatgattgttagcagcatgaaggagtatgaagacagagca
gttgaacttgctctaaatccggcgaagcttcaatcgttgactaataagctgaaggaagtt
cgaatgtcctgcccattatttgatacagcccgatgggtgcgcaaccttgaaagggcttac
tacaagatgtggaatctgtactgctctggtcgccacccagagccattcaaggtggaagag
gatgacaaggagttcccatttgaccgctaa
DBGET
integrated database retrieval system
