Panicum virgatum (switchgrass): 120655781
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Entry
120655781 CDS
T07260
Name
(RefSeq) galacturonosyltransferase 8-like
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120655781
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120655781
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120655781
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120655781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120655781
NCBI-ProteinID:
XP_039789683
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Position
1N:complement(38705742..38708888)
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AA seq
530 aa
AA seq
DB search
MAAAAGSPWRSAGPVASLALLLLLLLATAAAPAAAGGGSAAMNGDRLRAEQIRKQASDAA
ASAAALAAASRRLHLDRARHLRLLSSLHRNLTNTLRALSLAADADPSASDPAANASSPRQ
LDLQAKDLIRAARAAIAESKPLFDPQLKIQRLKDAIFAQNELLARAKKRGAFASLIAAKS
IPKPLHCLAVRLTAERIARPEQYADPVPPPRALEDPALFHYAIFSDNVLAASCVVRSAVA
NSNDPSKHVFHVVTDRMNLGAMQVIIHRMDLKGAHYEVKAFEDYKFLNSSYVPVLRQLES
ANLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQ
RDLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKAKFSPNACGWAYGMNFFDL
DSWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSIS
MEEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDEYIRQCNFAPP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggccgggagcccttggcgcagcgctgggcccgtcgcgtctctcgctctc
ctcctcctcctcctcctcgccaccgccgccgcgcccgcggcagctggcggcgggtccgcg
gccatgaacggggaccgcctccgggcggagcagatccggaagcaggcctcggacgccgcc
gcctcggccgccgcgctcgccgcggcgtcgcgccgcctccacctcgaccgcgcgcgccac
ctccgcctcctctcctcgctccaccgcaacctcaccaacacgctccgcgccctctccctc
gctgccgacgcggacccctccgcctccgaccccgccgccaacgcctcgtccccacgccag
ctcgacctccaggccaaggacctgatccgcgccgcgcgcgccgccatcgccgaatccaag
ccgctcttcgacccgcagctcaagatccagcgcctcaaggacgccatcttcgcgcagaac
gagctgctcgcgcgcgccaagaagcgcggcgccttcgcctccctcatcgccgccaagtcc
atccccaagccgctccactgcctcgccgtccgcctcaccgccgagcggatcgcgaggccc
gagcagtacgcggacccggtgccgccgccgcgggcgctcgaggaccccgcgctcttccac
tacgccatcttctccgacaacgtgctcgcggcctcatgcgtcgtgcgctccgccgtcgcc
aactccaacgacccctccaagcacgtcttccatgttgtcaccgaccggatgaacctcggc
gccatgcaggtgataatacaccgaatggacttaaaaggtgcacactatgaggtcaaagca
tttgaggattacaagtttctgaactcctcgtatgtccctgttctccggcaactggagtcc
gcaaaccttcaaaaattctattttgagaacaagcttgagaatgccaccaaagatgctagc
aatatgaagttcaggaatccaaagtatctatctatgctcaatcacttgcgattctatttg
ccggagatgtacccaaagctgcaccggattcttttcttggacgatgatgttgtggtacag
agggatcttacaggactgtggaagattgacatggatgggaaagtgaatggagccgtagaa
acatgctttgggtcttttcatcggtattggcagtacatgaacttctcacacccccttatc
aaagcaaagtttagtcctaatgcctgtggatgggcatatggcatgaacttctttgatctt
gattcttggaggagggaaaagtgtactgagcagtaccattactggcagaatcagaatgag
aaccggacattatggaagctaggaacgctgcccccaggcttaatcacattctactccacc
acgaagcctctggacaaatcctggcatgttcttgggcttggatacaatccaagcatcagc
atggaggagatcaggaatgctgctgttgtgcatttcaatggtaatatgaagccatggctg
gacatcggtatgaaccagttcaggcacctttggacaaagtacgtggactacgatgacgaa
tatatacgtcaatgcaattttgcaccaccatag
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