Panicum virgatum (switchgrass): 120655846
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Entry
120655846 CDS
T07260
Name
(RefSeq) 60S ribosomal protein L3-like
KO
K02925
large subunit ribosomal protein L3e
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
120655846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pvir03011
]
120655846
Ribosome [BR:
pvir03011
]
Ribosomal proteins
Eukaryotes
Large subunit
120655846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L3
DBL_C
Motif
Other DBs
NCBI-GeneID:
120655846
NCBI-ProteinID:
XP_039789746
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All DBs
Position
1N:complement(40886731..40889556)
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AA seq
420 aa
AA seq
DB search
MALGFTCPRPHSPHPSLPRRHPPTGKEEEARMSHRKFEHPRHGSLGFLPRKRASRHRGKV
KSFPRDDPKKPCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGL
VAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQLQ
LEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVD
AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVAR
AGQNGYHHRTEMNKKVYKIGKAGQESHDASTEFDRTEKDITPMGGFPHYGIVKGDYLMIK
GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQKFYGKVKA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccctagggtttacgtgcccgcgtcctcactcaccccacccgtccctcccgcgccgc
cacccccccacaggtaaggaggaggaggcgaggatgtcgcaccgcaagttcgagcacccg
aggcacggttccctcggcttcctccccaggaagcgcgcctcccgccaccggggcaaggtg
aaatccttccccagggatgaccccaagaagccatgccacctcactgccttccttggctac
aaggctggcatgacacacattgtacgtgaggtcgagaagcctggatccaaactccacaag
aaggaaacctgtgaagctgttaccatcattgaaactcctcctcttgtcattgttggtctt
gtggcatatgtgaagactcctcgtggcctccgcaccctcaactctgtctgggcacagcac
ttgagtgaggaagtgaggaggaggttctacaagaactggtgcaagagcaagaagaaggct
ttcactaagtatgctctaaagtatgacagtgatgcaggcaagaaggaaattcagctgcag
cttgagaagatgaagaagtatgcttctgttatccgcgtgattgcccacacccagattagg
aagatgaagggtttgaagcagaagaaggctcacctcatggagattcaggtcaatggcggt
accattgctgacaaggtggactatggctacaagttcttcgagaaggaggttccggttgac
gctgtgttccagaaggatgagatgattgacatcattggtgtgaccaagggtaagggttat
gagggtgtggtcactcgttggggtgtcacccgccttccccgcaagacccacaggggtctc
cgcaaggttgcctgtattggtgcctggcatccggctagggtttcctacactgttgcccgt
gctggtcagaatggttaccaccaccgtactgagatgaacaagaaggtttacaagattggc
aaggctggacaggagagccatgatgcctccacagagtttgacaggactgagaaggacatc
actcccatgggcggcttcccccactacggtatcgtgaagggcgactacctgatgatcaag
ggttgctgcgtcggccccaagaagagagtggtgaccctccgccagtccttgttgaagcag
acgtcacggctggccctggaggagatcaagctcaagttcatcgacacatcttccaagttt
gggcacggtcgcttccagaccaccgacgagaagcagaagttctacggcaaggtcaaggcc
taa
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