Panicum virgatum (switchgrass): 120655894
Help
Entry
120655894 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120655894
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120655894
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120655894
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120655894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120655894
NCBI-ProteinID:
XP_039789809
LinkDB
All DBs
Position
1N:42172041..42173887
Genome browser
AA seq
417 aa
AA seq
DB search
MIGRWKKCRPGPAPAVYISLPYKSSRCYPAPPTRPPLAYAIPPRPCRLSSSPFLQRHRPT
ASQPHPHPPRRVGVVRADPRMAVQAQHLAHAFHHHDYSRAISRPAMDDDAAAFLGEPAAG
HLVLRPPAPPPPQQQRQQVGGNTVFSDPRSELTCNNNLHDSVCFAPRKRARTGDVADDGL
TMEGHRALLPVPQPLAFAPMDDEQGRVLCSVDASTSGRLPGPGSAPASHSVLSHLYRHSV
EIDAFVRIENERLRSGLEEARRRHARAVVSAVERAAARRLRAAEADLERALARGAELGER
LRQVGAEGQAWRGIASGHEAAAAGLRATLEQLLLQAPRAGAEAEAEDARSCCFGPAQEGA
QAAAGSRGACRSCGAADACVLLLPCRHLCLCGGCEAGAEACPVCAAAKNASLHVLLS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcggtggaaaaagtgccggcccgggccggcaccggcggtatacatttcccta
ccctataagagctcgcgctgctaccctgctcctcccacccggccacccctcgcgtacgcg
atcccgccacggccgtgccgtttgtcgtcgtcgcccttcctgcagcgacaccgcccaacg
gcatcccagccccacccgcatcctcctcgtcgcgtaggcgtcgtccgggcggatccgcgg
atggccgtgcaggcgcagcacctcgcccacgccttccaccaccatgactactcccgcgcc
atcagcaggccagcaatggacgacgacgcggcggcgttcctcggcgagcccgccgccggc
cacctggtgctgcgaccccccgcgccgccgccgccgcagcagcagcggcagcaggtgggc
ggcaacaccgtgttcagcgacccgcgcagcgagctcacctgcaacaacaaccttcacgac
agcgtctgcttcgcgccgaggaagcgcgcgcggaccggcgacgtggcggacgacggcctg
accatggaagggcaccgcgcgctgctgccggtgccgcagccgctggcgttcgcgccgatg
gacgacgagcagggcagggtcctctgctccgtcgacgcgtccaccagcgggcgcctgccc
ggccccggctccgcgccggcctcgcacagcgtcctgtcgcatctctaccgccacagcgtc
gagatcgacgcgttcgttcgcatcgagaacgagaggctgcggtcggggctggaggaggcg
cggcggcggcacgcgcgcgccgtggtgtcggccgtggagcgtgcggcggcgcggcgcctg
cgggcggcggaggccgacctggagcgcgccctggcgcgcggcgcggagctcggggagcgg
ctccggcaggtgggcgccgagggccaggcgtggcggggcatcgccagcggccacgaggcc
gcggccgcgggcctgcgcgccacgctcgagcagctcctcctccaggcgccgcgcgcgggg
gccgaggccgaggccgaggacgcgcggtcgtgctgcttcgggccggcgcaggagggcgcc
caggccgccgccgggagccggggagcgtgcaggtcgtgcggcgcggcggacgcgtgcgtg
ctgctgctgccgtgccggcacctgtgcctgtgcggcgggtgcgaggcgggcgccgaggcg
tgccccgtgtgcgcggccgccaagaacgcctcgctccacgtcctcctgtcgtga
DBGET
integrated database retrieval system
