Panicum virgatum (switchgrass): 120655930
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Entry
120655930 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS4, chloroplastic
KO
K14347
solute carrier family 10 (sodium/bile acid cotransporter), member 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120655930
04147 Exosome [BR:
pvir04147
]
120655930
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
120655930
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120655930
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Motif
Pfam:
SBF_like
SBF
Ldr_toxin
Motif
Other DBs
NCBI-GeneID:
120655930
NCBI-ProteinID:
XP_039789849
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Position
1N:43006514..43018985
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AA seq
410 aa
AA seq
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MITHHPSLLRPPILTRRVGVLGRRPTLHSLLSATVASARPSTPPLRLRPVRAAASRVGGD
GGKGAAPPRALGAALLDFASSNFLPLALVSGVILGLLDPNLGCLAHKYSLSKYSTFGIFV
ISGLTLRTKELGAALEAWPAGLYGLASILLFTPFLAQFIMQLQLFPREFITGLAMFCCMP
TTLSSGVTLTQLVGGNSALALAITVVSNLLGIIFVPLCLAMYIGAGAGVSLPTEQLFRSL
VTRLLIPLIIGKVAREASKGIADFVDGNRQGFSVASAVLLSLVPWIQVSRSRSLILSVQV
KAFAAAVAIGVLLHLALLAFNATMLQILSRLEQKGVSVFAKKEYARAVILVASQKTLPVL
VAVVDQLGGAFGESGFLVIPGVAAHINQIIIDSIIVNWWRKRDQQFTIAN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgataacccaccatccttccctgctccgtccacccatcctgacccgccgcgttggggta
ctcggccggcgtccaacactccactccttgctgtccgccaccgtcgcctcggctcggcct
tctacgccgcccctccgcctgcggcctgtgcgcgccgccgcctcgcgggttggtggtgat
ggaggcaaaggcgcggcgccgcctcgagcgctgggggccgcgctgctcgacttcgcgagt
agcaacttcctcccccttgctcttgttagtggggtcatattgggtctcctagatcctaat
cttggatgccttgctcacaaatactccttgtcgaagtacagcacttttgggatatttgtg
atctcaggactgaccctgcgaaccaaggagcttggtgcagcattagaagcttggcctgct
ggactatatggactagcctctattttgctgtttacaccctttcttgctcagtttattatg
caacttcagctcttccctcgtgaatttatcactgggttagctatgttttgctgcatgcca
acaacattatcaagtggagtcacactaacacagcttgttggtggtaactcagcacttgct
cttgcaataacagttgtatccaatttacttggcattatctttgtacctctttgtctagca
atgtacattggcgctggagctggggtgtctctgcctactgagcaactattcagaagtctg
gtcacccgccttctaatcccgctgattatagggaaggttgctcgagaagcctcaaaaggt
attgctgattttgttgatggaaatcgacaaggcttttcagttgcaagtgctgttcttctc
agcctagtcccatggattcaagtaagtagatcaagatcactaatcttatctgttcaagta
aaagcttttgctgctgctgttgctattggagtgcttctacatcttgctctgttagctttc
aatgccacgatgttgcagatcttgtcacgtcttgaacagaaaggggtgtcagtctttgct
aaaaaagagtacgcacgagctgtcattttggtggccagtcagaaaacattgcccgtgttg
gttgctgtggttgatcagcttggaggagccttcggggagtccggatttctggtcatccct
ggtgtcgctgcacacattaaccagatcattattgattctatcatagtaaattggtggcgc
aagagggatcaacaatttactattgcaaactaa
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