Panicum virgatum (switchgrass): 120655978
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Entry
120655978 CDS
T07260
Name
(RefSeq) transcription factor E2FA-like isoform X1
KO
K06620
transcription factor E2F3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120655978
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
120655978
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Gene cluster
GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
TMF_DNA_bd
TrmB
ZapB
Motif
Other DBs
NCBI-GeneID:
120655978
NCBI-ProteinID:
XP_039789904
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All DBs
Position
1N:complement(43868891..43875735)
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AA seq
470 aa
AA seq
DB search
MSGVGSGRPPAAQKILQSLRPPIAFASPSRPPFAAPDDYHRFPTPAAAAAPAATSGGVGA
AGASDTIEEGLVIRTPLKRKATSEDNDAAESSDCIITSTGFPGSSMLTPVSGKTVKTSKS
KAKNNKAGPQTPTSNVGSPLNPETPAGTCRYDSSLGLLTKKFINLLKQAPDGILDLNIAA
ETLEVQKRRIYDITNVLEGIGLIEKTLKNRIRWKGLDDSGVDLDNGISALQAEVENLSLQ
EQALDEHIRDMREKLRGLTEDENNQRWLYVTEDDIKRLPCFQNETLIAIKAPHGTTLEVP
DPDEVGDYLQRRYRIVLRSTMGPIDVYLVSQFDEKFEDLGGVATPTRHTNMPRRYPIEDS
NTTNGGQCSTAMDVEQNVQQSQRTPQDPSALHDFGGMTRIIPSDVDTDADYWLLTEGDVS
ITDMWKTAPEVQWDQMDFLSEDVVTPPHAHNQQPVTVGGPQMQAPSMDKP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggtcggcagcggcaggccgccggccgcgcagaagatcctgcagtcgctgcgc
ccgcccatcgccttcgcctcgccgtcgcggccgcccttcgccgcgcccgacgactaccac
cgcttccccacgccggcagcggccgcggccccagccgccacctcgggcggcgtcggcgcg
gcgggcgcttctgatactatcgaggaggggctggtcatccggacgccgctaaaaagaaaa
gccacatctgaagacaatgatgctgctgagtcaagtgactgtattattactagcactgga
tttcctggtagttcgatgctcactccagtctctggaaaaactgttaaaacttcgaagtca
aaggcgaagaacaataaagctgggcctcaaacgcctacgtcaaatgttggttcacctctc
aatccagaaacgcctgctggcacttgccgctatgacagttcattggggcttctgacaaaa
aagttcattaacctgctcaagcaggctccagatggcattttagatttgaatattgctgca
gaaacactagaggttcaaaaacggcggatatatgacattaccaatgtccttgaaggaatt
ggattaatagagaagacacttaagaacagaatccgttggaagggcctggatgattcaggt
gttgatttggataatggtatttctgcattgcaggcagaagttgaaaatcttagcctgcag
gagcaagcattagatgagcatatacgtgatatgcgtgaaaaactaaggggcttaactgaa
gatgaaaacaatcaaaggtggctatatgtgactgaagatgatatcaagagattgccctgc
tttcagaatgaaacactaattgcgataaaagcacctcatggtactacacttgaagtcccg
gatccggatgaggttggtgattatcttcaaaggagatatagaattgtattaagaagtaca
atgggaccaatagatgtttacttggttagtcaatttgatgagaaatttgaggacttgggt
ggtgttgcaacacctacaaggcatacaaatatgcctagacgttatcccattgaagattcc
aatacaacaaatggtggacaatgtagcacagcaatggatgtggaacaaaatgttcaacaa
agccagaggactccacaggatcctagtgctttgcatgattttggagggatgacaaggatt
attccttcggatgttgacacggatgctgattactggctcctaacagagggtgatgttagc
attactgatatgtggaaaacagcaccagaagtgcagtgggaccagatggacttcttgtct
gaagacgttgtcacaccacctcatgcccataatcagcagccagtcacagtcggtgggcca
cagatgcaggctccaagcatggataaaccataa
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