Panicum virgatum (switchgrass): 120656021
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Entry
120656021 CDS
T07260
Name
(RefSeq) probable tocopherol O-methyltransferase, chloroplastic
KO
K05928
tocopherol O-methyltransferase [EC:
2.1.1.95
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120656021
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.95 tocopherol C-methyltransferase
120656021
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GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
CMAS
Methyltransf_12
Ubie_methyltran
FtsJ
MTS
Methyltransf_32
Methyltransf_20
Anamorsin_N
Methyltransf_29
MetW
Motif
Other DBs
NCBI-GeneID:
120656021
NCBI-ProteinID:
XP_039789940
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All DBs
Position
1K:48012913..48016005
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AA seq
467 aa
AA seq
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MVCLNSFEDTAHLAKRPTVVAHLKKNCLNFTILIANSLSPPNLPRHYDFRFTFIFVRLLL
LLARRGKAHHVSPCHSQRLHSCTVQAQHSAQSRHTPRLASASASASFKYGRKWLPRRCST
LPSPPRALPQPAAATAAARRRYGRSHRAPPPVARRSRRHLLRPMASPTTAQAPAPAPPGL
KEGIAGLYDESSGLWESIWGDHMHHGFYDSGEAASMADHRRAQIRMIEEALAFAAVPDDP
EKKPKTVVDVGCGIGGSSRYLAKKYGAQCKGITLSPVQAERGNALAAAQGLSDQVSLQVA
DALEQPFPDGQFDLVWSMESGEHMPDKSKFVSELARVAAPGGTIIIVTWCHRNLEPSETS
LKPDELNLLKRICDAYYLPDWCSPSDYVSIAKSLSLEDVKTADWSENVAPFWPAVIKSAL
TWKGITSLLTSGWKTIRGAMVMPLMIQGYKKGLIKFTIITCRKPGAA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtctgcttaaactcttttgaagacacggcccacctagcaaaaagacccaccgtggtt
gctcatctaaaaaaaaactgcctcaatttcacaatcctgatagcaaactcactcagtcct
cccaacctgccgcggcactacgattttcgtttcaccttcattttcgtccgattattatta
ttactcgcacgccggggaaaggcgcatcacgtttcgccctgccacagccagcgcctccac
agttgcacggtgcaagcgcagcacagcgcgcagagccgccacacccctcgcctcgcctcc
gcctccgcctccgcctcctttaaatacggccgcaaatggctcccgcggcgctgctccacc
ctgccctcccctccacgagcgctgccgcagcccgccgccgctacggccgcagcccgccgc
cgctacggccgcagccaccgcgcccctccgcccgtcgcgcgccgctcccgccgccacctg
ctgcgcccgatggcctcgccgacgacggcccaggcccccgcgccggcgcccccgggcctg
aaggagggcatcgcggggctctacgacgagtcgtcggggctctgggagagcatctggggc
gaccacatgcaccacggcttctacgactccggcgaggcggcctccatggcggaccaccgc
cgcgcccagatccgcatgatcgaggaggcgctcgccttcgccgccgtcccagatgatccg
gagaagaagcccaaaacggtagtcgatgtaggatgcggaattggtggtagctcgaggtac
ctggccaagaaatacggagcacagtgcaagggcatcacgctgagccccgttcaagctgaa
agaggaaacgctctcgccgctgcgcaggggttgtcggatcaggtttctctgcaagttgct
gatgctctggagcaaccgtttcctgatggacagttcgatcttgtgtggtccatggagagt
ggcgagcacatgccggacaagagcaagtttgttagtgagctggcacgcgtggcggctcct
ggagggacaataatcatcgtgacatggtgccatcggaacctggagccatctgaaacctcg
ctgaaaccggatgaactgaacctcctcaagaggatttgcgatgcgtactaccttcctgac
tggtgctcaccctcagactatgtgagcatcgccaagtctctgtctctcgaggatgtcaag
acagccgattggtcggagaacgtggccccattctggccggccgtgataaaatcagcactg
acatggaagggcatcacctctctcctgacaagcgggtggaagacgatcagaggggcgatg
gtgatgccactgatgatccagggctacaagaaggggctcatcaagttcaccatcatcacc
tgtcgcaagcccggagcagcgtag
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