Panicum virgatum (switchgrass): 120656026
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Entry
120656026 CDS
T07260
Name
(RefSeq) trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656026
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120656026
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Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_19
TPR_1
TPR_17
TPR_8
TPR_14
TPR_9
TPR-S
TPR_CcmH_CycH
CFAP410_C
TPR_11
TPR_12
Motif
Other DBs
NCBI-GeneID:
120656026
NCBI-ProteinID:
XP_039789945
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All DBs
Position
1N:complement(44777762..44780434)
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AA seq
322 aa
AA seq
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MAATSPLPPPATNAAAPGLPDLSIPYDLAARGQWQALLSHLSHPAHVPHPHHRLLLSALS
ALSLAKLRRFPDAAALLASLHPDSACPPPPFLIRLLHALLPLFLPDRPLALDRLYTLLSS
VRAPHPEWRRRAALVASLLAADHLAHREFDVALALLADIAAREPGDPVLLSRLAYAHLQI
GNLSAAAAAFRHVEYVAAAAEDPARHANLLARNRALECIVAKDYAAAVREYERCIEADPA
DAVALNNKALCLMYSRDLGDAIKVLEGALERVPTAALNETVVVNLCSMYELAFVNHGEVK
RSLAEWIARVAPDDFDTSCTRM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacctccccgctcccgccgccggcgaccaacgccgccgcgccaggcctcccc
gatctctcgatcccctacgacctggccgcccgcgggcagtggcaggcgctgctctcccac
ctctcccacccggcccacgtcccgcacccgcaccaccgcctcctcctctcagcgctctcc
gccctctccctcgccaagctccgccgtttccccgacgccgccgcgctgctcgcctccctc
cacccggactcggcctgcccgccgccgccgttcctcatccgcctcctccacgcgctcctc
ccgctcttcctccccgaccgccccctcgcgctcgaccgcctctacaccctcctctcctcc
gtccgcgccccgcaccccgagtggcgccgccgcgccgccctcgtcgcgtccctcctcgcc
gccgaccacctcgcccaccgcgagttcgacgtcgccctcgccctcctcgccgacatcgcc
gcgcgcgagccgggcgacccggtgctcctctcccgcctcgcctacgcgcacctccagatc
ggcaacctctccgcggccgccgccgcgttccgccacgtggagtacgtggccgccgcggcc
gaggaccccgcgcggcacgccaacctcctcgcccgcaaccgcgcgctggagtgcatcgtg
gccaaggactacgcggcggcggtgcgggagtacgagcgctgcatcgaggcggaccccgcg
gacgccgtggcgctcaacaacaaggcgctgtgcctcatgtactcgcgggacctcggcgac
gccatcaaggtgctcgagggcgcgctcgagagggtgcccacggcggccctcaacgagacg
gtggtggttaacctgtgcagcatgtacgagctcgccttcgtcaaccacggcgaggtcaag
aggagcctcgccgagtggatcgccagggttgctcccgacgacttcgacacctcctgcacg
cgcatgtag
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