Panicum virgatum (switchgrass): 120656087
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Entry
120656087 CDS
T07260
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120656087
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656087
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120656087
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120656087
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120656087
Ion channels [BR:
pvir04040
]
Chloride channels
Chloride channel (CLC)
120656087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
120656087
NCBI-ProteinID:
XP_039790024
LinkDB
All DBs
Position
1N:complement(45632975..45644062)
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AA seq
810 aa
AA seq
DB search
MDGGSPRPPRSPEREGSYNYDIESMDGSVAGGGPPWRPQNGSAEALLRYDEGGDGDRGSA
REPLLRKRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQYIVLKWS
LVLLIGLLTGLVGFFNNLAVENIAGFKLLHTSRLMLKERYFKAFLVYGGCNLVLAASAAA
ICAYVAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVH
TGACIANLLGQGGSRKYHLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFAL
EEAASWWRSALLWRTFFTTAVVAVVLRGLIEFCRSGKCGLFGQGGLIMFDLSSTIATYNT
PDLIAIIVLGIIGGIFGGLFNFLLDKILRVYSIINERGAPFKILLTITISIITSMCSYGL
PWLAACTPCPVDAVEQCPTIGRSANYKNFQCPQGYYNDLASLFFNTNDDAIRNLFSNGTA
NEFRMSSLFIFFTAIYCLGLVTYGVAVPSGLFIPVILAGATYGRIVGTLLGSISDLDPGL
FALLGAASFLGGTMRMTVSVCVILLELTNDLPMLPLVMLVLLISKTIADNFNKGVYDQIV
VMKGLPYMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRITGHNGFPVVDEPP
ITETPELVGLVTRSHLLVLLNSKNFMKGQVKTSGSFVLRRFGAFDFAKPGSGKGLKIEDL
DFTDEEMDMYVDLHPITNTSPYTVVETMSLAKAAILFRELGLRHLLVVPKTPDRPPIVGI
LTRHDFMPEHIHSLFPNLNPHKYHSASMAG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggctccccgcggccgccccgcagtccggagcgggaggggagctacaactac
gacattgagagcatggacggctccgtggccgggggcgggccaccgtggcggccgcagaac
ggctccgccgaggccctgctccgctacgacgaggggggtgacggcgaccgcgggagcgcg
cgcgagccgctgctgcggaagcgcaccatgaacaccacatcccagatcgccatcgtgggc
gccaacgtctgccctatcgagagcttggattacgaagttgtggagaacgacctcttcaag
caagattggcgatcaagaaagaagaagcagatatttcagtacattgttctcaagtggagc
ttggtgcttcttattggcttgttaactggacttgttggcttcttcaacaaccttgcggtt
gaaaacattgctggattcaagttgctgcacacgagtcgtctgatgctcaaggagagatat
ttcaaagcatttttggtgtatggaggttgcaatttagtcttggcggcatctgcagcagca
atctgtgcttatgttgcacctgctgctgctggatccggtattcctgaagttaaagcatat
cttaatggggttgatgcttattctatattggctcctagtacactttttgttaagatattt
ggttcaatacttggagtttcagctggatttgtactaggaaaagaaggccctatggtacac
acaggagcatgtattgccaacttgcttggtcagggaggatcacgcaagtatcatcttaca
tgcaactggctaagatactttaagaatgacagggataggagagatttaattacatgtgga
tctgcagctggagtggcagctgccttccgtgcacctgttggcggtgttctgtttgctctt
gaagaagcagcatcatggtggcgaagtgcacttctgtggagaacattctttacaactgct
gttgttgctgtggtattgaggggactgattgaattctgtcgcagtggaaaatgtggtcta
tttgggcaaggtggattgatcatgtttgatctcagttcaactattgcaacctacaatact
ccagatctgattgcaatcatagtccttggtataattggtggcatctttggaggcctcttc
aactttctcttggacaagatcctgcgagtttatagtatcatcaatgagaggggtgctcca
ttcaagatccttctcaccataacaatatcaataatcacatcaatgtgttcctatggtctt
ccttggcttgctgcatgcactccatgcccagttgatgctgtggagcagtgtccaactatt
ggccgttctgcaaattacaaaaacttccaatgcccacaaggatattacaatgatcttgca
tcactcttcttcaacaccaatgatgatgccatccgcaacctcttcagcaacggcaccgcg
aatgagttccgcatgtccagtcttttcattttcttcactgctatttactgccttggactt
gtgacttacggggttgctgtcccctctggcctcttcatccctgttattcttgctggagcc
acttatgggcgcattgtgggaacacttcttggatctatatccgatcttgatccaggcctt
tttgcccttcttggtgccgcatcttttctcggtggaacaatgagaatgactgtttccgtt
tgtgtgatccttctagagctcaccaatgatcttcccatgctccctttggtcatgcttgta
cttctcatatccaagaccatagcagataacttcaacaagggggtttatgatcagatagtg
gtgatgaaaggtttgccatacatggaggctcatgctgaaccatacatgagacatttggtt
gctggtgatgtggtttctggcccactaatcaccttttcaggtgttgagaaggtgggaaac
attgttcacgcgttgaggataacgggccacaatgggtttcctgttgttgatgagccgcct
ataacggaaaccccagagctggttgggcttgtgactaggtcccatctattggttttactg
aacagcaagaatttcatgaaggggcaggtgaaaactagtggtagctttgttctgcgaaga
tttggtgcctttgactttgcaaagccaggatcagggaaaggtttgaaaattgaggacctg
gatttcactgatgaggagatggacatgtatgtggatctccatccgattacaaacacctca
ccttatacggtagttgagacaatgtcactggcgaaagccgcaatccttttccgggaacta
gggttgaggcacctcttggttgtgcccaagacaccagacaggcctcccatagttggaatt
ctgacaaggcatgatttcatgcctgaacacattcacagtctgtttccaaatctcaaccct
cacaagtaccattcagcgtctatggcaggttga
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