Panicum virgatum (switchgrass): 120656098
Help
Entry
120656098 CDS
T07260
Name
(RefSeq) CDT1-like protein a, chloroplastic
KO
K10727
chromatin licensing and DNA replication factor 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120656098
03036 Chromosome and associated proteins [BR:
pvir03036
]
120656098
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
120656098
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120656098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDT1_C
CDT1
ASTN_1_2_N
Gp44-like_2nd
CbiG-like_linker
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
120656098
NCBI-ProteinID:
XP_039790044
LinkDB
All DBs
Position
1N:complement(45804901..45807842)
Genome browser
AA seq
565 aa
AA seq
DB search
MEMDAGTPSKKAKTSAAAGATPQKPWKADQILTPEKLTPKVTAAAEQIWTPEKPEERPTA
RGRSVAFSVKEVRRAALGLRRPEKGTRAAAEEADELESLERELGVGAGASQSPVKRKAEV
KLPESYEMLCEFFNCLESSTRLLRMKGSKASFPNICASIQHLSERRFTYSHLAQLKYIMP
EAIVINKILLRDDTTCCMKPDLQVNLVVGAVESVKKQKGETAYSALRRIFRQRLVDFFRD
HPEGDDVPEHELPHPFNRTRLSMPQAAPRVVPEPASPIEASDVNGQQATMMSHMSQSFKR
RFSQRSPISSAIANATSQLAKVESTVLSPLSRNSLSSSYVSATKEAQPEEDDKVAVSMSG
VSEGTPAKYASTPVRLMASTPDLTTPKRPISDAGYGTPPLKMSKRSARAKLFTTPTKVAS
MDEKDENAISAVDSDDELLSFLPQSLLQSVKQKEQRTMEEKETGFADKVKRQKLIASLPS
MFDVVFLIYQSRQRSVMTKQELIHKIVASSPKIVDRSEVEEQLTLLKELVPEWISERSAR
SGDVLCCVDATLSQADIRKRLYAAE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagatggacgccggcacgccatccaagaaggccaagacatcggcggctgccggcgcc
acgccgcagaagccgtggaaggccgaccagatcctgacgccggagaagctgacgccgaag
gtcacggcggcggccgagcagatctggacgccggagaagcccgaggagaggccgacggca
cgcggccgcagcgtggcgttctccgtgaaggaggtgcgccgggcggcgctcgggctgcgg
aggccggagaagggaacgcgggcggcggccgaggaggcggacgagctcgagtccctcgag
cgggagctcggtgttggcgccggggctagccagagccccgtcaagcgcaaggctgaagtc
aagctgccggaaagttatgagatgctttgtgagttcttcaactgcctggagagctccact
cggctgctccgtatgaagggatccaaggcctccttccccaacatctgcgctagcatccag
catctgtctgaacggaggtttacctacagccatcttgcgcagctcaagtacataatgccc
gaggcaattgtcatcaataagatccttttgcgtgatgacacaacatgctgtatgaagcca
gatcttcaggtgaaccttgtggttggtgctgttgagagtgtcaagaagcagaagggggaa
actgcatactcagcattgagaaggatcttcaggcagaggctagtggatttcttcagggac
catcctgagggagatgacgtaccagagcatgaattgccacatccatttaaccgaacaaga
ttgagcatgccccaggctgccccaagagttgttcctgaaccggcatccccaatcgaggct
tctgatgtcaatggacaacaggctactatgatgtcacacatgtcacagtcattcaagaga
aggttttcgcagaggtctccaatcagttctgcaatagctaacgcaaccagtcaattggcg
aaggttgagtccactgttctatcaccattgagcaggaattccctctccagtagctatgtt
tctgctactaaagaagctcagccagaggaggatgacaaggttgctgtatccatgtctgga
gtttcagagggcacacctgctaaatatgcctctacgccagtgaggttaatggcatccaca
ccagaccttacgacaccaaagagaccaatctctgatgcaggttatggcacaccacctcta
aaaatgtcaaagagatcagctcgtgctaagttgtttaccactccaacaaaggttgctagt
atggatgaaaaggacgaaaatgctatttctgctgttgatagtgacgatgaattactcagt
tttcttccacaatccctccttcagtcggtaaagcagaaggaacagaggactatggaggag
aaggaaactggttttgctgataaggttaaaaggcagaagttgattgcttccctgccaagt
atgtttgatgttgtatttcttatctaccagtcaagacagcggtctgtaatgacaaagcag
gagctgattcataagatagttgcaagcagtccaaagattgtggacagaagtgaagttgaa
gagcagctgacattgttgaaagagcttgttccagagtggatctctgagaggagtgcacgg
agtggagatgttctatgctgcgttgatgcaactttgagccaagcggatattcgcaaaaga
ctgtatgctgctgagtag
DBGET
integrated database retrieval system
