KEGG   Panicum virgatum (switchgrass): 120656103
Entry
120656103         CDS       T07260                                 
Name
(RefSeq) DNA repair protein XRCC3 homolog
  KO
K10880  DNA-repair protein XRCC3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    120656103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120656103
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecA family proteins
     120656103
SSDB
Motif
Pfam: Rad51 DUF7125 ATPase PAXNEB
Other DBs
NCBI-GeneID: 120656103
NCBI-ProteinID: XP_039790053
LinkDB
Position
1N:45857028..45861270
AA seq 345 aa
MRPPAPKPPAASSSSSYSLREPRPENPLLLLPSCRAAKLSLGCPLLDRILSGGLPAASVT
EIAEESASGNTHLCLQLALLAPQSPLSASALFLHSDLPFPLHRLRGLAPKSRPDILDHVL
VAAAHSPTDLLSLLSRAQRLLAHPGRSPHRLPIRLIILDSIASLFRADFDASPADLKRRS
ALFFQISAKLKELAYRHHCVVVVTNQVVDVVEGNAGNTVAWSSGRRVSPALGIAWANCVN
TRLFLTREVDGASGTERRRMKVAFAPHLPERACEFVIRRDGVFGVEPAGEVSAFCLTWAW
SPYMASKASGRAHQATVQRCQGRIISSHVSANMLRRTGVHGYADG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcggccgccggcgcctaagccccctgctgcctcctcctcgtcctcctacagcctgcgc
gagccccgtccagagaacccgctcctcctcctcccttcctgtcgcgccgccaagctatcc
ctcggctgccccctcctcgaccgcatcctctccggcggcctccccgccgcctccgtcacc
gagatcgccgaagaatccgcctccggaaacacccatctgtgcctccagctcgccctcctc
gcgccccagtccccgctctccgcctccgccctcttcctccactccgacctcccgttccct
cttcaccgcctccgtggcctcgcccccaaatcccgccccgatatcctcgaccacgtcctc
gtcgccgccgcgcactcccccaccgacctcctctccctcctctcgcgcgcccagcgcttg
ctcgcccaccccggccgctcgccgcaccgcctccccatccgcctcatcatcctcgactcc
atcgcctccctcttccgcgccgacttcgacgcctcaccggccgacctcaagcgccggtcc
gcgctcttcttccagatatccgcgaagctcaaggagctggcctacaggcaccactgcgtg
gtggtggtgaccaaccaggtcgtggacgtggtggagggcaacgccgggaacaccgtggcg
tggtcgtcggggcgccgggtcagccctgcgctcgggattgcgtgggccaactgcgtcaac
acgcggctgttcctgacgcgggaagtggacggcgccagcgggaccgagaggaggcggatg
aaggtggcgttcgcgccgcacctgccggagcgggcgtgcgagtttgtgatacggagggac
ggcgtgtttggcgttgagccggcgggagaggttagtgcattttgtttaacttgggcgtgg
tctccatatatggcaagtaaagcatcaggcagagcacatcaagcaacagttcagaggtgc
caaggacgaatcatctctagccatgtatctgcaaatatgttaaggcgcaccggagtccac
ggatatgcagatggataa

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