Panicum virgatum (switchgrass): 120656103
Help
Entry
120656103 CDS
T07260
Name
(RefSeq) DNA repair protein XRCC3 homolog
KO
K10880
DNA-repair protein XRCC3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120656103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120656103
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
120656103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
DUF7125
ATPase
PAXNEB
Motif
Other DBs
NCBI-GeneID:
120656103
NCBI-ProteinID:
XP_039790053
LinkDB
All DBs
Position
1N:45857028..45861270
Genome browser
AA seq
345 aa
AA seq
DB search
MRPPAPKPPAASSSSSYSLREPRPENPLLLLPSCRAAKLSLGCPLLDRILSGGLPAASVT
EIAEESASGNTHLCLQLALLAPQSPLSASALFLHSDLPFPLHRLRGLAPKSRPDILDHVL
VAAAHSPTDLLSLLSRAQRLLAHPGRSPHRLPIRLIILDSIASLFRADFDASPADLKRRS
ALFFQISAKLKELAYRHHCVVVVTNQVVDVVEGNAGNTVAWSSGRRVSPALGIAWANCVN
TRLFLTREVDGASGTERRRMKVAFAPHLPERACEFVIRRDGVFGVEPAGEVSAFCLTWAW
SPYMASKASGRAHQATVQRCQGRIISSHVSANMLRRTGVHGYADG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgccggcgcctaagccccctgctgcctcctcctcgtcctcctacagcctgcgc
gagccccgtccagagaacccgctcctcctcctcccttcctgtcgcgccgccaagctatcc
ctcggctgccccctcctcgaccgcatcctctccggcggcctccccgccgcctccgtcacc
gagatcgccgaagaatccgcctccggaaacacccatctgtgcctccagctcgccctcctc
gcgccccagtccccgctctccgcctccgccctcttcctccactccgacctcccgttccct
cttcaccgcctccgtggcctcgcccccaaatcccgccccgatatcctcgaccacgtcctc
gtcgccgccgcgcactcccccaccgacctcctctccctcctctcgcgcgcccagcgcttg
ctcgcccaccccggccgctcgccgcaccgcctccccatccgcctcatcatcctcgactcc
atcgcctccctcttccgcgccgacttcgacgcctcaccggccgacctcaagcgccggtcc
gcgctcttcttccagatatccgcgaagctcaaggagctggcctacaggcaccactgcgtg
gtggtggtgaccaaccaggtcgtggacgtggtggagggcaacgccgggaacaccgtggcg
tggtcgtcggggcgccgggtcagccctgcgctcgggattgcgtgggccaactgcgtcaac
acgcggctgttcctgacgcgggaagtggacggcgccagcgggaccgagaggaggcggatg
aaggtggcgttcgcgccgcacctgccggagcgggcgtgcgagtttgtgatacggagggac
ggcgtgtttggcgttgagccggcgggagaggttagtgcattttgtttaacttgggcgtgg
tctccatatatggcaagtaaagcatcaggcagagcacatcaagcaacagttcagaggtgc
caaggacgaatcatctctagccatgtatctgcaaatatgttaaggcgcaccggagtccac
ggatatgcagatggataa
DBGET
integrated database retrieval system