Panicum virgatum (switchgrass): 120656115
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Entry
120656115 CDS
T07260
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120656115
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP100
120656115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_22
AAA_5
MCM
Mg_chelatase
RuvB_N
Sigma54_activ_2
Sigma54_activat
AAA_14
AAA_16
FoP_duplication
ABC_tran
AAA_7
IstB_IS21
nSTAND3
DEAD
T2SSE
AAA_28
AAA_18
FAM104
AAA_29
AAA_24
TsaE
RNA_helicase
Terminase_6N
NACHT
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
120656115
NCBI-ProteinID:
XP_039790070
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All DBs
Position
1N:46016708..46023632
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AA seq
644 aa
AA seq
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MSGLLRWRRLAGAATRAASTLTAAECSPAAAAVGGAVAPLPPPPHRLLQERRKWESSSSG
GSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPAAGAGGGYQALNLCPNCRSAY
FFRPHDLAPLQGTFVEIGRVRADLFDHPAARARDPSFWEAIRARSSSRDDGDGGGVAVHV
PPGPPFHPNLNVVRVAGGGGGGGGGGGAGGEEGAGKEGWGGSNLGKDLPTPKEICKGLDK
YVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADSGSFDGEADDDDNVELEKSNVLLMG
PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQG
MVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQID
TKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGVSSAQVTSSLLESVESGD
LIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNALGKQFKKLFSMNNVKLHFTDGA
LRIIAKKAMSKNTGARGLRTILENILMDSMYEIPDAKSGEKRIDAVVVDEDAVGSVDQPG
CGAKILYGDGALDQYLSQIKASGDGAGNEVDGEVELSPSRAIGM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcctcctccggtggaggcgcctcgccggcgccgccacgcgcgccgcgtccacc
ctcaccgcggcagagtgctccccggccgccgctgcggttggtggcgccgtcgcgcctctt
ccgccgccgccgcacaggctcctccaggagcggcgcaagtgggagtcctcctcctcgggg
ggcagctcgtcgtcgtcctcgaccgacgagcccgagccgcgccgcatccgcgccgaggcc
cactgcccgcgctgctccaagcacatggacatcctcttctcccaccggggcccgccggcc
gcgggggccggcggcgggtaccaggcgctcaacctctgccccaactgccgcagcgcctac
ttcttccgcccgcacgaccttgcgccgctccagggcaccttcgtcgagatcggacgcgtc
cgggccgacctcttcgaccacccagccgcgagggccagagacccctccttctgggaggct
atccgggcgaggtcctcgtcgcgcgacgacggggacggtgggggcgtggccgtgcacgtg
ccgcccggcccgccgttccaccccaaccttaacgtcgtccgcgtcgctggtggaggcggc
ggagggggaggtggcgggggcgctggtggtgaggagggagcagggaaggaggggtggggt
gggtccaatttggggaaggatctgcccacgcccaaggagatttgtaaggggctcgacaag
tacgtgattgggcaggatagagccaagaaggtgttatctgtcgcagtttacaaccactat
aaacggatataccatcaatctttacaaaaggggtctggggcagattcgggtagttttgat
ggggaagctgatgatgacgacaatgtggaactagagaaaagcaatgtactgttaatggga
cctactgggtcaggtaaaactttacttgcaaagacattagctcgctttgtgaatgtacca
tttgtaattgccgatgcgacaacattgacccaggcagggtatgtaggagaagatgtagaa
tcaatactatacaagttactcacggtggcagattttaatgtgcaagcagcacagcaagga
atggtgtacattgacgaagttgataagattacaaagaaggctgagagccttaacattagt
agagacgtgtcgggtgaaggtgttcagcaggcattgctgaaaatgctggaaggcacgata
gtcaacgttcctgagaaaggagcaaggaagcatcctcgtggtgataatatacagatagat
acgaaggacattctttttatatgcggtggtgcttttgtggacttggagaaaactatatct
gagagacgacaggattcctctattggctttggggcaccagtccgtgcaaacatgagggct
ggtggtgtttcaagtgctcaagtgacatcatccttgttagagtcggttgaaagtggcgac
ctaatagcatatggacttatcccggaatttattggacgttttcctatccttgttagctta
gctgctttaaatgaggaccagcttgttcaggttctcacggagccaaagaatgctttgggt
aaacaattcaagaaattgtttagcatgaataatgttaagcttcattttacagatggggct
cttagaataatcgccaaaaaggcaatgtccaaaaatacgggtgctcgggggttaagaact
atccttgagaatattctcatggattccatgtatgagattccagatgcaaaatctggggag
aagcgaatcgatgcagtggttgtggatgaggatgcagtaggatcagtggatcaacctggc
tgtggagccaagatcctttacggtgatggtgccttggatcaatatctctcccagatcaaa
gcgtcaggagatggagcaggaaacgaagtggacggagaagttgagctttcaccatcgcga
gccatagggatgtga
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