Panicum virgatum (switchgrass): 120656161
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Entry
120656161 CDS
T07260
Name
(RefSeq) probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00740
Riboflavin metabolism
pvir00790
Folate biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
120656161
00790 Folate biosynthesis
120656161
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
120656161
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
120656161
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
SWM_repeat
Motif
Other DBs
NCBI-GeneID:
120656161
NCBI-ProteinID:
XP_039790122
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Position
1N:complement(46753699..46758341)
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AA seq
551 aa
AA seq
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MASLASPSSSVAAALTRQPTRFLKGCSVSKETKGSVCNLFTPNSNNAKVKSVGSRISSSL
KRDGGYPAAGASGNGDVLLARSTSVRGQDHSVADPVLSTDSMVAPEILSANLARVVDKFA
DEDTDTELDLDSPTEGFASIADAIEDIRQGKLVIVVDDESRENEGDLIMAASLVTSEAMA
FIVRHGTGIVCVSMKEEDLERLDLPLMVTAKENEEKLCTAFTVTVDAKEGTTTGVSAKDR
AKTVMTLASPDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPVAVLCE
IVDDVDGSMARLPKLRVFAERENLKIISIADLIRYRRKRDRLIERASVARLPLRWGNVRA
YCYRSVIDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGDQLAMSMEMIEK
AGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRD
LGVRSMKLMTNNPAKYSGLKGYGLSIAGRVPLLTPITSENRRYMETKRTKMGHVYGQANQ
ASDSNSAGEKH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcttgcaagtccatcttcctcagtcgccgccgccctcacccgtcaaccgacg
cggttcttgaaagggtgcagtgtctccaaggagacaaagggctcggtttgcaacctcttc
actccaaattcaaataatgccaaagtaaaatcagtgggctcgagaatatcatcatccttg
aaaagggatggtggctatccagccgctggtgcctctgggaatggcgacgtgctattggca
agaagtacttccgtacgtggccaggaccattcggttgctgaccctgtactctcgacggat
tccatggttgcgccagaaatcctctctgctaatctggcacgtgttgtggacaagtttgca
gatgaagacacagacactgaacttgatttggatagcccgacagagggctttgcatctatt
gcagatgccattgaggacatacggcaaggaaaacttgtgattgttgttgatgacgagtca
agggaaaatgaaggagaccttataatggctgcttccttggttacctcagaggctatggct
tttatagtaaggcatgggactggaattgtgtgtgtcagcatgaaagaagaagatctggaa
agactggaccttccattgatggttactgcgaaagaaaatgaggagaagctatgcactgct
ttcactgtcacagtggatgcgaaagagggcacaacaactggggtatctgccaaggacagg
gcaaaaacagtcatgactcttgcatctcctgactcaaagcctgaggatttcaatcgcccc
ggtcatattttccctttgaaatacagagaaggaggtgttctgaaacgagctggacacacc
gaggcttctgttgaccttgccatgctggctggattacctcctgttgctgtcctttgtgag
attgtggacgatgtagatggctccatggctcgcctaccaaaactacgtgtgtttgctgaa
agggagaatttgaagattatatctattgctgacttgattagatataggaggaaaagagac
aggctaattgaacgtgcttctgttgcacgtttgcctttgagatggggcaatgtccgtgcc
tattgctacagatctgtcattgatggaattgaacatattgcaatggtgaaaggtgagatt
ggtgatggtcaagatattttggtgagggttcactccgagtgcctgactggagacattttt
ggatctgcaaggtgtgattgtggtgaccagcttgccatgtcaatggaaatgattgagaag
gctggaagaggtgtattagtttaccttcgtggtcatgaaggaaggggtattggtctgggt
cacaagctccgtgcttacaacttgcaagatgacgggcgtgacactgtggaagctaatgaa
gagctagggcttcctgttgattcacgggaatacgggattggtgcacagatattacgggat
ctaggagtccgttcaatgaagttgatgaccaataaccctgcaaagtatagcggcctcaag
ggttacggattaagcattgcgggcagggtgcccttgctgacgccaataaccagtgagaat
aggaggtacatggagaccaaaagaacaaagatggggcatgtgtatggacaggctaaccaa
gcaagtgacagcaacagcgcaggagagaagcactaa
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