Panicum virgatum (switchgrass): 120656177
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Entry
120656177 CDS
T07260
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120656177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656177
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120656177
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120656177
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120656177
Exosomal proteins of colorectal cancer cells
120656177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
APG6_N
CDT1
Sporozoite_P67
MRB1590_C
NAM-associated
Motif
Other DBs
NCBI-GeneID:
120656177
NCBI-ProteinID:
XP_039790176
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All DBs
Position
1K:complement(4449580..4453728)
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AA seq
232 aa
AA seq
DB search
MSWRIPLFGSQQQQTDPNFPDIPTQSWYPPSVVGSSSRPSTPTSSSASPHQRASDHPQSS
SRGQPSPAEAARIIARLKDKSIEELQRLLKDKEAYNAFFNSLDQVKTQNNVRDELRKETL
QLARENLEKEQRILELRNQCTIIRTTELAAALDRLTDLERQKDDIMRSYSPAALLDKLQT
SMAKLDEESEELHQKFLEKDIDLPTFVQKYKKLRTTYHKQALLHLAGQTSLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaggattcctctctttggctctcagcagcagcaaacagacccaaatttcccg
gacatacctacgcaatcttggtaccctccatcggtggtaggctcatcttcacgtccatcc
acacctacctcttctagtgctagcccacatcaaagagcttcagatcatcctcagtcttca
tcccgtgggcaaccatctcctgctgaagctgcaaggataattgctcgtttgaaggataag
agtattgaggagttacagaggctattgaaagacaaagaggcatacaatgcattctttaat
tcacttgatcaagttaaaacccagaacaatgtacgggatgagcttagaaaggagacattg
caacttgcaagggaaaatttagaaaaggagcagcggattttggagctccggaatcagtgc
acaataataagaaccacagaactggctgctgctctagacaggctaactgatttggagagg
caaaaggatgatattatgaggtcatattcccctgctgcgctgctcgacaagctccaaaca
tcaatggcaaagctggacgaggagtctgaggagctgcaccagaagttcctggagaaggac
atcgacctgcctacctttgtgcagaagtacaagaagctccgcaccacctaccacaagcag
gcgctgcttcatctcgccggccagacatcactgcgctga
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