Panicum virgatum (switchgrass): 120656201
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Entry
120656201 CDS
T07260
Name
(RefSeq) transcription factor MYB106-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120656201
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120656201
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
NSP2-B_epitope
Motif
Other DBs
NCBI-GeneID:
120656201
NCBI-ProteinID:
XP_039790168
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Position
1N:47144254..47146336
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AA seq
322 aa
AA seq
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MGRSPCCEKEAGLKKGPWTPEEDQKLLVFIEQHGHGCWRSLPAKAGLRRCGKSCRLRWTN
YLRPDIKRGKFTLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKM
GIDPVTHKPRADAGAGAGASSGARYRAAAHLSHTAQWESARLEAEARLAREAKLRALASP
PAPPPPASGLESPTSTLSFSESALFAGAAHDDVHGAARAPAVLTPHSYAEAFGEQHRFGD
DAATPGFLAGVLLDCAVAGAEQRFVAASADASVLEQQQEEEDRGYWSSILNMVNSSMSSS
SSSLTSEAVTDPAMYLPAAAEF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggggcggtcgccgtgctgcgagaaggaggccgggctgaagaagggcccgtggacgccg
gaggaggaccagaagctgctcgtcttcatcgagcagcacggccacggctgctggcgctcg
ctgccggccaaggctgggctgcggcggtgcggcaagagctgccggctccggtggaccaac
tacctgcggccggacatcaagcggggcaagttcacgctccaggaggagcagaccatcatc
cagctccacgcgctcctcggcaacaggtggtcggcgatcgcgacgcacctgcccaagcgc
acggacaacgagatcaagaactactggaacacgcacctcaagaagcgcctcgccaagatg
ggcatcgaccccgtcacgcacaagccccgcgccgacgcgggcgccggcgccggcgcctcc
tccggcgcgcgctacagggccgccgcgcacctcagccacacggcgcagtgggagagcgcg
cggctcgaggcggaggcgcgcctggcgcgcgaggccaagctgcgcgcgctcgcctcgccg
cccgcgccgccgccgccggccagcgggctcgagtcgcccacctcgacgctcagcttctcc
gagagcgcgctgttcgccggcgcggcccacgacgacgtgcacggcgcggcgcgcgcgccc
gccgtcctgacgccgcactcgtacgcggaggcgttcggggagcagcaccggttcggtgat
gacgccgccacgccaggcttccttgccggcgtccttcttgactgtgctgtcgccggcgcg
gagcagaggttcgtggccgcgtcggcggacgctagcgtccttgagcagcagcaggaggag
gaggacaggggctactggagcagcattctgaatatggtcaactcgtccatgtcgtcgtct
tcgtcgtcgttgacttccgaggctgtcacggacccggcgatgtacttgccggcggcggca
gagttctga
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