Panicum virgatum (switchgrass): 120656202
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Entry
120656202 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 27-like
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120656202
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120656202
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GFIT
Motif
Pfam:
K-box
SRF-TF
bZIP_1
Stn1
BAR_3
GW
INO80F
ResIII
DivIC
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
120656202
NCBI-ProteinID:
XP_039790169
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All DBs
Position
1N:47178257..47185483
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AA seq
240 aa
AA seq
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MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYECSST
SMKSVIDRYGKAKEEQQVVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLPGLNV
KELQSLENQLETSLRGVRSKKDHLLIDEIHELNRKASLFHQENMDLYNKINQIRQENAEL
YKKIYQTEGPSEVNRESSTPYNFAVVENTDVPVQLGLSTLPQQNNIEPSTAPKLGLQLNP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaaagattgtgatccgcaggatcgacaactccacgagcaggcaggtgacc
ttctccaaacgccggaacgggatcttcaagaaggctaaggagctcgctatcctctgcgat
gccgaggtcggcctcatgattttctccagcaccggccgcctctacgagtgctctagcacc
agcatgaaatcagtgatagatcggtatggcaaggccaaggaagagcagcaggttgtcgca
aatcccaactcggagcttaagttttggcaaagggaggcagcaagcttgagacaacaactg
cacaacttgcaagaaaatcataggcagttgatgggagaggatcttcctgggcttaatgtt
aaggaactgcagtccctagagaatcagttggaaacaagcctgcgtggagtccgctcaaag
aaggaccatctcttgattgatgaaattcacgaattgaatcgaaaggctagtttatttcat
caagaaaacatggacttgtacaataaaatcaaccagattcgtcaagaaaatgctgagtta
tataagaagatctatcagaccgaaggaccaagcgaagttaatcgggaatcatcgactcca
tacaactttgcagtagtagaaaacacagatgttcctgtgcaacttggactcagcacactg
ccacaacaaaacaacatcgagccatcgactgctcccaagcttggattgcagttaaatcca
tga
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