Panicum virgatum (switchgrass): 120656284
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Entry
120656284 CDS
T07260
Name
(RefSeq) ribosomal RNA-processing protein 8-like isoform X1
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120656284
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
120656284
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120656284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_31
Methyltransf_25
Anamorsin_N
Methyltransf_23
Methyltransf_29
Motif
Other DBs
NCBI-GeneID:
120656284
NCBI-ProteinID:
XP_039790261
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Position
1N:48289747..48294122
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AA seq
300 aa
AA seq
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MEPPHESAAGGRKRRRRGGDRNRWKPSSSSQQEPPPAAAPAPLSSPPAKRRRKDGTGQAA
AAPKRGNTSSLLEKMRARLSGGHFRMLNEKLYTCSGQDAFDYFKNDPTLFDVYHTGYREQ
MSHWPEQPVNVIINWLKRHNASWTVADFGCEYHLHVAGNAAVAKNVENKVFSIDLVSDDP
SVIACDMAHTPLESSSVDVAIFCLSLMGTNYPNYLEEANRVLNPSGWLVIAEVRSRLDPN
NGGADPEKFSKAIIQLGFSLVSKDEKNKMFILFYFKKKEKSKVAKSIDWPQLKPCLYKRR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccgcatgagtccgccgccggtggccgcaagcgacgccggcgaggtggcgac
cggaaccgctggaagccctcttcgtcctcgcaacaagaacctccgccagcggcggcaccc
gcaccgctgtcctcccctccggcaaagcggcggcgcaaggacggcaccggccaggccgcg
gccgcacccaagcgaggcaacacctcgagcctactcgaaaagatgcgtgcaaggttatct
ggtggccatttcagaatgctaaacgagaagctctacacttgcagtgggcaggatgcgttt
gactacttcaaaaatgaccctactctttttgatgtgtatcatacaggatatcgagaacag
atgtcacattggccagagcagccagtaaatgtgataatcaattggttgaagagacataat
gcatcatggactgttgctgattttggatgtgaataccatttacatgtcgcaggcaacgca
gcagttgcaaaaaatgtggagaacaaggttttctccattgatcttgtttcagatgatcct
tcagtgattgcttgtgatatggctcatactccattggagtcatcctcggtagatgttgca
atattttgtctttctttgatgggaaccaactatccaaattacttggaggaagcaaatagg
gtactcaatccaagtggttggcttgttattgccgaagtgcgaagtaggctagacccaaat
aacggtggtgctgaccctgaaaagttttctaaagccatcatccagcttggcttttccctt
gtttcaaaggacgagaaaaacaaaatgttcattctgttctacttcaagaaaaaggaaaag
agtaaggtggcaaagagcatcgattggcctcagttgaaaccttgcctgtacaagcgtcgc
tga
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