Panicum virgatum (switchgrass): 120656317
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Entry
120656317 CDS
T07260
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120656317
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120656317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656317
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120656317
04147 Exosome [BR:
pvir04147
]
120656317
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Arp2/3 complex
120656317
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120656317
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120656317
Exosomal proteins of other body fluids (saliva and urine)
120656317
Exosomal proteins of bladder cancer cells
120656317
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Motif
Other DBs
NCBI-GeneID:
120656317
NCBI-ProteinID:
XP_039790304
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Position
1N:48848716..48852635
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AA seq
433 aa
AA seq
DB search
MDALSRPAVVIDNGTGYTKMGFAGNVEPCFITPTAVAVNDSLAASAQPAPRGAPAKGNWL
AQHSAGVMADLDFYIGEEALARSRASSTYSLSYPIRNGQVENWDTMERFWQQCIFNYLRC
DPEDHYFLLTESPLTAPETREYTGEIMFETFNVPGLYIAVQPVLALAAGYTTTKCEMTGV
VVDVGDGATHIVPVADGYVIGSSIRSIPLTGKDVTQFVHQLMKERGENIPPEESFDVARR
VKEMYCYTSSDIVKEFNKHDREPSKYIKHWTGIKPKTGAKYTCDIGYERFLGPEIFFNPE
IYNSDFTTPLQVVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDAR
VRASNTRLISGDPKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGA
SICRTNPVFKGMY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctgtcccgccccgccgtcgtcatcgacaacggcaccgggtacacgaagatg
gggttcgcggggaacgtggagccctgcttcatcacccccaccgccgtcgccgtcaacgac
tccttagccgcctccgcgcagccggcgcccaggggcgcccccgccaaggggaactggctc
gcgcagcacagcgccggggtcatggccgacctcgacttctacatcggggaggaggcgctg
gcgcggtcccgcgccagcagcacctacagcctcagctaccccatccgtaatggccaggtg
gagaattgggatactatggagaggttttggcaacagtgcatcttcaattacctgcggtgc
gacccggaggaccattactttcttctaaccgagagccctctgactgctcctgagacccgg
gagtacacaggagagatcatgttcgagacgttcaatgtgcctggcctctatatagcagtc
caaccggtcctggcgctcgctgccgggtacactacaaccaagtgtgaaatgacaggtgtt
gtagttgatgtgggtgatggagctacccacattgttcctgtggctgatggttatgtcatt
gggagcagtatcagatctattccgcttacaggcaaggatgttacccagtttgtccaccaa
cttatgaaggaaagaggtgagaacattccgccagaggaatcttttgatgtagcgaggagg
gttaaagaaatgtactgctatacttcttcagacattgtgaaggaattcaataagcatgac
agagagccctcgaagtacattaaacactggactggcatcaaaccaaaaactggtgcaaaa
tacacgtgcgacattggatatgagcgattcttggggcctgagatattcttcaacccagag
atttacaatagtgacttcaccactcctttacaagttgttattgacaagtgcatccaatca
gccccaatcgacacaagaagagctctgtataaaaatattgtcttgtctggaggatcgact
atgtttaaggatttccatcggagattacaacgggacctaaaaaagatagtggatgcacgg
gtccgtgcatctaatactcggcttattagtggagatcctaaggcacaacctatagaagtg
aatgtggtcagtcatccgattcagcgatatgcagtatggtttggcggttctgtgcttgct
tccacagcagagttctacgaggcttgccacacaaaagcagaatacgaagagtacggtgcg
agcatctgccgaacaaatcctgttttcaaagggatgtattga
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