Panicum virgatum (switchgrass): 120656445
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Entry
120656445 CDS
T07260
Name
(RefSeq) AP2-like ethylene-responsive transcription factor BBM1
KO
K09285
AP2-like factor, ANT lineage
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120656445
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
120656445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP2
MoeA_C
Motif
Other DBs
NCBI-GeneID:
120656445
NCBI-ProteinID:
XP_039790470
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Position
1N:50566506..50571259
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AA seq
679 aa
AA seq
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MASANNWLGFSLSGQENPQPNQDSSPAAGIDISGTSDFYGLTTQQGSDGHLGVPGLRDDH
ASYGIMEAFNRGQQETQDWNMRGLDYNGGASELSMLVGSSGGGGGGSGKRAVEDTEPKLE
DFLGGNSFVSEQDQSGGYLFSGVPMSSSTNSNSGSNTMELSMIKTWLRNNQVPQPQPPAT
HQPQPEEMSTDASASSFGCADSLGRNGTVAGGCSQSLALSMSTGSHLPMVVVGGGSASGA
AASDSTSSENKRVNGAMDSPSSAIEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWD
NSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKELEEMKH
MTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEA
AEAYDIAAIKFRGLNAVTNFDMSRYDVKSILESSTLPVGGAARRLKDAVDHVEAGGATIW
RADMDGAVISQLADAGMGAYASYGHHGWPTIAFQQPSPLTVHYPYGQAPSRGWCKPEQDA
AVAAAAHSLQDLQQLHLGSAAHNFFQASSSSTVYNGGAAGYHQAGLGAGGAGSFLMPSST
VVADQGHSSTANQGSTCSYGDDQEGKLIGYDAMVATAGGDPYAAARSGYQFSQGSGSTMS
IARANGYSNNWSSPFNGMG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccaacaactggctcggcttctcgctctcgggccaggagaacccgcagcct
aatcaggatagctcgcctgccgccggcatcgacatctccggcaccagcgacttctacggc
ctgacgacgcagcagggctccgacgggcacctcggcgtgccgggcctgcgggacgatcac
gcttcttatggcatcatggaggccttcaacaggggccagcaagaaacccaagattggaac
atgagaggtctggactacaacggcggcgcctcggagctctcgatgctcgtcggctcgagc
ggcggcggcggcgggggcagcggcaagagggcggtggaggacaccgagcccaagctcgag
gacttcctcggcggcaactcgttcgtctccgagcaggatcaatccggcggctacctcttc
tccggggtcccgatgtccagcagcaccaacagcaacagcgggagcaacaccatggagctg
tccatgatcaagacctggctccggaacaaccaggtgccccagccgcagccgccggcgacg
catcagccgcagcctgaggagatgagcaccgacgccagcgcgagcagcttcggctgcgcg
gattcgctcggaaggaacggcacggtggcgggtgggtgctcgcagagcctcgcgctctcg
atgagcaccggctcgcacctcccgatggttgtggtcggcggcggcagcgccagcggagcg
gcggcctcggatagcacgtcgtcggagaacaagcgggtgaacggcgccatggattccccc
agcagcgcgatagaagccgtcccgaggaagtccatcgacacgtttgggcagaggacatct
atatatcgaggtgtaacaagacatagatggacagggcgttatgaggctcatctctgggat
aatagctgtagaagagaaggacagagccgcaagggtaggcaagtttatctcggtggctat
gacaaggaggataaggcagcaagggcttacgatttggcagctctcaagtattggggcaca
actaccacaacaaattttccaataagtaactatgaaaaagagctagaggaaatgaaacat
atgactaggcaggagtatattgcatacctaagaaggaatagcagtggattttctcgcggg
gcatcaaagtatcgaggagtaactagacaccatcagcatgggagatggcaagcaaggata
gggagagttgcaggaaacaaggatctctaccttggcacattcagcaccgaggaggaggcg
gcggaggcctacgacatcgccgcgatcaagttccgcgggctcaacgccgtcaccaacttc
gacatgagccgctacgacgtgaagagcatcctcgagagcagcacgctgcccgtcggcggc
gcggccaggcgcctcaaggacgccgtggaccacgtggaggccggcggcgccaccatctgg
cgcgccgacatggacggcgccgtgatctcgcagctggccgacgccgggatgggcgcctac
gcctcgtacggccaccacggctggccgaccatcgcgttccagcagccgtcgccgctcacc
gtgcactacccgtacggccaggcgccgtcccgcgggtggtgcaagcccgagcaggacgcc
gccgtcgcggccgcagcgcacagcctgcaggacctgcagcagctgcacctcggcagcgcc
gcccacaacttcttccaggcgtcgtcgagctcgacggtctacaacggcggcgccgccggg
taccaccaggcgggcctcggtgctggcggcgccggctccttcctcatgccgtcgagcacc
gtcgtggccgaccagggccacagcagcacggccaaccaggggagcacctgcagctacggg
gacgaccaggagggaaagctcatcgggtacgacgccatggtggcgaccgccggcggggac
ccgtacgccgccgcgaggagcgggtaccagttctcgcagggctcggggtccacgatgagc
atcgcgagggcgaacgggtactccaacaactggagctccccgttcaacggcatggggtga
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