Panicum virgatum (switchgrass): 120656470
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Entry
120656470 CDS
T07260
Name
(RefSeq) two-component response regulator-like PRR1
KO
K12127
pseudo-response regulator 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120656470
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GFIT
Motif
Pfam:
CCT
Response_reg
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120656470
NCBI-ProteinID:
XP_039790500
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Position
1N:50799251..50802491
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AA seq
522 aa
AA seq
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MVGGGEGDRVGGSGGAGVAVGGGQQFVDRSKVRILLCDGDATSSREVLRLLCNCSYQVTC
AKSPRQVINILNYEGSEIDIILAEVDLPVTKCFKMLKYIARNKDLRHIPIIMMSNRDEVS
VVVKCLRLGAAEYLVKPLRTNELLNLWTHVWRRRRMLGLPEKNFFNDNFELVLSEPSDAN
TNSTTLLSDETDDRPKENMNQETGTSNQREYESNPSAAETELRGKTEGVPGSVVDADQAS
SPGRMFSRPIKTNLRVGESSAFLAYVKSSTPVTSSFDSELQRGGSRLESFDNQGNCSSAT
DRSDTGTDVNIRDKEAYEMPVQYPMVCFSSSNLHMERSNDGQNGTSGTPPMYHYPFYYPG
MVEHSIALSSVQNFPANVNNAQGHTQPTMIPQYNAYPQCYGVPMMPSFQFNPGGMIMHSN
HLPTQNMWSSGSSTPVPEETCSRSERRAAALAKFRQKRKERCFDKKVRYVNRKKLAETRP
RVRGQFVRQAGNTDIISTGDDISEDEDDDPSSREVEMVSSPE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcggcggcgagggggatcgcgttggcggcagcggcggcgccggggtggcggtg
gggggagggcagcagttcgtggaccggagcaaggtcaggattctgctctgcgacggcgac
gccaccagctcgcgggaggtgctgcggctcctctgcaactgctcgtaccaagtaacttgc
gcaaagtctccgcggcaggtgatcaatattctcaactacgagggcagcgagatcgacatc
atcctggctgaggtcgatctcccggtcacaaagtgcttcaagatgctcaagtacattgct
aggaacaaggacctgcgccacatccccatcatcatgatgtccaacagagatgaggtctcg
gttgttgtcaagtgcttgcggcttggggcagccgagtacctggtgaagccattgcgcacc
aatgagctgctgaacctttggacccatgtgtggcggcggagacggatgcttggtttgccc
gagaaaaacttcttcaatgacaacttcgagttggtgctctcagaacctagtgatgccaat
acaaatagcaccaccctcctctcagatgagacagatgataggccaaaagaaaacatgaat
caagagactggcacctcaaatcaacgtgaatacgagtctaatccttctgctgctgagacc
gaactaagaggcaaaacggagggtgtgccaggttctgttgtagatgcagatcaagcatcg
tcaccaggaagaatgttttcacgccctataaaaactaatctgagggttggcgaatcgtct
gcatttctagcatatgttaagtcaagcaccccagtcaccagctcatttgatagtgaatta
caaagaggtggcagtcggttagaatcttttgataaccagggtaattgctctagcgcaact
gacagaagtgacaccggtactgatgtaaatatccgggataaagaagcttatgagatgcct
gtacagtaccctatggtatgcttttcatcatctaacctacatatggagcgaagcaatgat
ggccaaaatggtacttcaggaactccacctatgtaccattacccattttattatccaggg
atggtggagcacagcatagcactttcttcggtgcaaaattttccagcgaacgtaaacaat
gctcaaggacatacacaaccaacgatgatcccccagtacaatgcttatccccaatgctat
ggtgtacctatgatgccatcgtttcagtttaatcccggtggtatgattatgcactcaaat
catttaccgacacaaaatatgtggtcatcagggtcaagcacaccagtgcctgaggaaaca
tgcagtcgctctgaaaggagggccgcagcacttgctaaatttaggcagaaaaggaaagag
cgctgttttgacaagaaagtgaggtatgtgaatcggaagaaacttgctgaaacaaggcca
agggtacgaggacagtttgttaggcaggcaggcaataccgatattatcagcactggagat
gatatctctgaagatgaagatgacgatccatcgtccagggaggtagagatggtttcttct
ccagagtag
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