Panicum virgatum (switchgrass): 120656487
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Entry
120656487 CDS
T07260
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120656487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120656487
Membrane trafficking [BR:
pvir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120656487
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120656487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EHD_N
EH
MMR_HSR1
EF-hand_1
EF-hand_7
GTP_EFTU
TsaE
AAA_28
AAA_16
Motif
Other DBs
NCBI-GeneID:
120656487
NCBI-ProteinID:
XP_039790555
LinkDB
All DBs
Position
1K:complement(4546329..4550800)
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AA seq
547 aa
AA seq
DB search
MEIARAAAGVACSKEHQRIYAEWFALADPDGDGRVTGADATSFFGMSGLSRADLKQVWAI
ADSKRQGYLGFAEFVTAMQLVSLAQGANEITQDSLKREDLSTLDPPVMEGVDELVARSKV
VVKKVHPDDNGTSQVQAPSVYHWFGSKSAQKAQMPLTAVTSVIDGLKRLYVEKLKPLEVA
YRFNDFANPLLTSNDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHVGPEPTTDRFVV
VMSGSDGRTIPGNTIAIQADMPFTGLTTFGGAFLSKFECSQMPHPLLEHITFVDTPGVLS
GEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLN
KADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPVNDSAVGPIGKDLFEREQ
DDLLCDLKDIPKKACDRRVNEFVKRARAAKIHAYIIGHLKKEMPAMMGKAKAQQRLIDNL
EDEFAKVQREYHLPAGDFPDVEHFKQVLGGYSIDKFEKLKPKMVQAVDDMLAYDIPELLK
NFRNPYE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcgcgagccgcggccggcgtggcctgctccaaggagcaccagaggatctac
gcggagtggttcgccctcgccgacccagatggcgacggccgcgtcacgggcgccgacgcc
accagcttcttcggcatgtccgggctctcgcgcgccgatctcaagcaggtatgggcgatc
gcggattccaagcggcaggggtacctcggattcgccgagttcgtcacagcaatgcagctc
gtttctctggcccaaggggcgaacgagatcacacaggacagcctcaaacgtgaagacctc
agcaccttggacccgcctgtgatggaaggtgtcgatgagctagttgctagatccaaggtt
gttgtgaagaaagttcacccagatgacaatggtacctctcaggtccaagctccttccgta
tatcactggtttggctcaaaatcagcacagaaggcccagatgcctttgactgctgttacc
tctgtaattgatggcttgaaaagactgtatgttgagaaactgaagcctttggaagtcgca
tacagattcaatgattttgctaacccattattgacaagcaatgattttgatgcaaagcca
atggttatgctcttgggtcagtattctacagggaaaacaacattcattaagcatctgctg
aagacaagctacccaggagctcatgttggaccagagccaactactgatagatttgtagtt
gtcatgtctggatccgatggaaggactatccctggcaatactattgctattcaagccgac
atgccattcactggtcttacaacatttgggggagcatttttgtcaaagtttgaatgctct
cagatgccacatccattactagagcatatcacctttgtagacactcctggagttctctct
ggtgaaaagcagcggacccaacgcagctatgatttcactggtgtcacttcatggtttgct
gccaagtgtgaccttatcctccttctgtttgaccctcacaagcttgatataagtgatgaa
ttcaaacgtgtcatttcatcgttacgtgggcatgatgacaaaatacgtgtagtgttgaac
aaggcagaccaagttgacactcagcagcttatgagagtgtatggtgcgctgatgtggtct
cttggaaaagtgctaaatactcctgaggttgtgcgtgtgtatatcgggtcattcaatgat
aaaccagtgaatgactcagctgtaggcccaattggaaaagatttgtttgagagggaacaa
gatgacctcctctgtgacctgaaagatattccaaagaaggcctgtgaccgccgagtcaat
gagtttgtcaagcgcgctcgagccgccaagattcatgcttacataattggccatctgaag
aaggagatgcccgcaatgatgggaaaagctaaggctcaacagcgactcatagacaacttg
gaagatgagtttgcaaaggtgcagagggagtatcatctccccgccggagacttcccagac
gtggagcacttcaagcaggtgttgggtgggtacagcatcgacaagttcgagaagctcaag
cccaagatggtgcaggcggtggacgacatgctcgcgtacgacatcccggagctcctcaag
aacttcaggaacccctacgagtga
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