KEGG   Panicum virgatum (switchgrass): 120656514
Entry
120656514         CDS       T07260                                 
Name
(RefSeq) protein CNGC15b-like
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    120656514
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pvir04040]
    120656514
Ion channels [BR:pvir04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   120656514
SSDB
Motif
Pfam: Ion_trans cNMP_binding
Other DBs
NCBI-GeneID: 120656514
NCBI-ProteinID: XP_039790553
LinkDB
Position
1N:51375801..51378852
AA seq 688 aa
MASAASQNVRFQNDIEVQHFRSSPLENLGRKHGKGHDPRRCRLGGFRGGCLEKACRNPTL
RDRVLSRAFSEELESLVHAGGRLFFDPRGHLIHLWSKIFLSACLLSLFVDPLFLYLTGTR
RGMCIEFKYPLALTLSMIRSLLDLFYAAHILFRFRTAFIAPSSRVFGRGELVIQPCKIAR
RYLGRTFWFDLVTALPLPQFVIWIVIPRLNESPTANRKNILRFSILFQYLPRLFQIFPLS
RQIVMATGVMTETAWAGAAYNLILYMLASHVLGALWYLFSVQRQESCWREACLLQGTACQ
TMFFDCKTVSGNRSIWYELSNITSLCTTSNGFYPFGIYGEALDAKLTSSSFTQKYFYCFW
WGLKNLSCLGQNLSTSLFIGEIAFAIVIGVLGLVLFGLLIGNMQSYLQATMVRLEEWRSK
RTDMERWMHHRQIPQPLKQCVRRYHQYKWVATRGVDEEALLRDLPMDIRRDIKRHLCLDL
VRRVPLFDEMDERMLEAICERLRPALYTRGTRLVRELDPVDSMLFIIRGYLDSNTTQGGR
SGFFNSCRIGAGEFCGEELLTWALDPRPAAALPLSTRTVRAVSEVEAFALVADDLRFVAS
QFRRLHSARVRHRFRFYSHHWRTWAACFILAAWRRHKRRRASTEIRVREGGDGRGAGDSL
RRSRRHSIDGKAPIKKPVEPDFTVEEED
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggcatccgctgcttcacaaaatgtcaggtttcagaatgacatcgaggttcagcacttc
agaagtagccccctggagaacctcggcaggaagcacggcaaaggtcacgaccccaggaga
tgccgcctgggtggcttccgcggcgggtgcctggagaaggcctgccggaacccgacgctc
agggaccgggtgctgtcgcgcgccttctcggaggagctcgagtccctggtgcacgccggc
gggcgcctcttcttcgacccgcgcgggcacctgatccacctgtggagcaagatcttcctg
tccgcctgcctgctgtcgctgttcgtggacccgctgttcctgtacctgacgggcacgcgg
cgcggcatgtgcatcgagttcaagtacccgctggcgctgacgctctccatgatccggtcg
ctgctggacctcttctacgccgcgcacatcctgttccgcttccgcaccgccttcatcgcg
ccgtcgtcgcgggtgttcgggcgcggggagctcgtcatccagccctgcaagatcgccagg
aggtacctcggccggaccttctggttcgacctcgtcaccgcgctgccgctgccgcagttc
gtgatctggatcgtgataccgcggctgaacgagtcgccgacggcgaaccggaagaacatc
ctccgcttcagcatcctgttccagtacctcccgcggctgttccagatcttcccgctgtcg
aggcagatcgtcatggcgaccggggtcatgacggagacggcgtgggccggcgccgcgtac
aacctgatcctctacatgctcgccagccacgtgctgggagcgctgtggtatctcttctcg
gtgcagcggcaggagtcgtgctggagggaggcgtgcctgctgcagggcacggcgtgccag
accatgttcttcgactgcaagacggtgagcggcaacaggagcatctggtacgagctgagc
aacatcaccagcctgtgcacgaccagcaacgggttctacccgttcgggatctacggggag
gcgctggacgccaagctcacgtcctcgtccttcacccagaagtacttctactgcttctgg
tgggggctcaagaacctgagttgcctaggccagaatctgtcgacgagcctgttcatcggt
gaaatcgccttcgcaatcgtcatcggcgttcttgggttggtgctgtttggcctgctcatc
ggcaacatgcagtcctatctccaggcgacgatggtgcggctggaggagtggcggtcgaag
cgcacggacatggagcggtggatgcaccaccggcagatcccgcagccgctgaagcagtgc
gtgcggcggtaccaccagtacaagtgggtggccacccgcggcgtggacgaggaggccctg
ctccgggacctgcccatggacatccgccgcgacatcaagcgccacctgtgcctggacctc
gtccggcgggtgcccctcttcgacgagatggacgagcggatgctggaggccatctgcgag
cggctgcggccggcgctctacacgcggggcacgcgcctggtgcgggagctggaccccgtg
gactcgatgctcttcatcatccggggctacctcgactcgaacacgacgcagggcgggcgg
tcgggtttcttcaactcgtgccgcatcggcgccggcgagttctgcggggaggagctcctg
acgtgggcgctggacccgcggcccgcggcagcgctgccgctctccacccgcaccgtgcgc
gccgtgtccgaggtcgaggcgttcgcgctcgtcgccgacgacctccgcttcgtggcgtcg
cagttccggcgcctgcacagcgcgcgggtccgacacaggttccggttctactcgcaccac
tggcgcacctgggccgcgtgcttcatcctggccgcctggcggcgccacaagcgccgccgc
gcgtccacggagatcagggtgcgcgagggcggcgacgggcggggcgccggggacagcttg
aggcggtcccgacgccacagcatcgacggcaaggcgccgatcaagaagcccgtggagccg
gacttcacggtcgaggaagaggactga

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