Panicum virgatum (switchgrass): 120656514
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Entry
120656514 CDS
T07260
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120656514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120656514
Ion channels [BR:
pvir04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120656514
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120656514
NCBI-ProteinID:
XP_039790553
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All DBs
Position
1N:51375801..51378852
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AA seq
688 aa
AA seq
DB search
MASAASQNVRFQNDIEVQHFRSSPLENLGRKHGKGHDPRRCRLGGFRGGCLEKACRNPTL
RDRVLSRAFSEELESLVHAGGRLFFDPRGHLIHLWSKIFLSACLLSLFVDPLFLYLTGTR
RGMCIEFKYPLALTLSMIRSLLDLFYAAHILFRFRTAFIAPSSRVFGRGELVIQPCKIAR
RYLGRTFWFDLVTALPLPQFVIWIVIPRLNESPTANRKNILRFSILFQYLPRLFQIFPLS
RQIVMATGVMTETAWAGAAYNLILYMLASHVLGALWYLFSVQRQESCWREACLLQGTACQ
TMFFDCKTVSGNRSIWYELSNITSLCTTSNGFYPFGIYGEALDAKLTSSSFTQKYFYCFW
WGLKNLSCLGQNLSTSLFIGEIAFAIVIGVLGLVLFGLLIGNMQSYLQATMVRLEEWRSK
RTDMERWMHHRQIPQPLKQCVRRYHQYKWVATRGVDEEALLRDLPMDIRRDIKRHLCLDL
VRRVPLFDEMDERMLEAICERLRPALYTRGTRLVRELDPVDSMLFIIRGYLDSNTTQGGR
SGFFNSCRIGAGEFCGEELLTWALDPRPAAALPLSTRTVRAVSEVEAFALVADDLRFVAS
QFRRLHSARVRHRFRFYSHHWRTWAACFILAAWRRHKRRRASTEIRVREGGDGRGAGDSL
RRSRRHSIDGKAPIKKPVEPDFTVEEED
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgctgcttcacaaaatgtcaggtttcagaatgacatcgaggttcagcacttc
agaagtagccccctggagaacctcggcaggaagcacggcaaaggtcacgaccccaggaga
tgccgcctgggtggcttccgcggcgggtgcctggagaaggcctgccggaacccgacgctc
agggaccgggtgctgtcgcgcgccttctcggaggagctcgagtccctggtgcacgccggc
gggcgcctcttcttcgacccgcgcgggcacctgatccacctgtggagcaagatcttcctg
tccgcctgcctgctgtcgctgttcgtggacccgctgttcctgtacctgacgggcacgcgg
cgcggcatgtgcatcgagttcaagtacccgctggcgctgacgctctccatgatccggtcg
ctgctggacctcttctacgccgcgcacatcctgttccgcttccgcaccgccttcatcgcg
ccgtcgtcgcgggtgttcgggcgcggggagctcgtcatccagccctgcaagatcgccagg
aggtacctcggccggaccttctggttcgacctcgtcaccgcgctgccgctgccgcagttc
gtgatctggatcgtgataccgcggctgaacgagtcgccgacggcgaaccggaagaacatc
ctccgcttcagcatcctgttccagtacctcccgcggctgttccagatcttcccgctgtcg
aggcagatcgtcatggcgaccggggtcatgacggagacggcgtgggccggcgccgcgtac
aacctgatcctctacatgctcgccagccacgtgctgggagcgctgtggtatctcttctcg
gtgcagcggcaggagtcgtgctggagggaggcgtgcctgctgcagggcacggcgtgccag
accatgttcttcgactgcaagacggtgagcggcaacaggagcatctggtacgagctgagc
aacatcaccagcctgtgcacgaccagcaacgggttctacccgttcgggatctacggggag
gcgctggacgccaagctcacgtcctcgtccttcacccagaagtacttctactgcttctgg
tgggggctcaagaacctgagttgcctaggccagaatctgtcgacgagcctgttcatcggt
gaaatcgccttcgcaatcgtcatcggcgttcttgggttggtgctgtttggcctgctcatc
ggcaacatgcagtcctatctccaggcgacgatggtgcggctggaggagtggcggtcgaag
cgcacggacatggagcggtggatgcaccaccggcagatcccgcagccgctgaagcagtgc
gtgcggcggtaccaccagtacaagtgggtggccacccgcggcgtggacgaggaggccctg
ctccgggacctgcccatggacatccgccgcgacatcaagcgccacctgtgcctggacctc
gtccggcgggtgcccctcttcgacgagatggacgagcggatgctggaggccatctgcgag
cggctgcggccggcgctctacacgcggggcacgcgcctggtgcgggagctggaccccgtg
gactcgatgctcttcatcatccggggctacctcgactcgaacacgacgcagggcgggcgg
tcgggtttcttcaactcgtgccgcatcggcgccggcgagttctgcggggaggagctcctg
acgtgggcgctggacccgcggcccgcggcagcgctgccgctctccacccgcaccgtgcgc
gccgtgtccgaggtcgaggcgttcgcgctcgtcgccgacgacctccgcttcgtggcgtcg
cagttccggcgcctgcacagcgcgcgggtccgacacaggttccggttctactcgcaccac
tggcgcacctgggccgcgtgcttcatcctggccgcctggcggcgccacaagcgccgccgc
gcgtccacggagatcagggtgcgcgagggcggcgacgggcggggcgccggggacagcttg
aggcggtcccgacgccacagcatcgacggcaaggcgccgatcaagaagcccgtggagccg
gacttcacggtcgaggaagaggactga
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