Panicum virgatum (switchgrass): 120656612
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Entry
120656612 CDS
T07260
Name
(RefSeq) protein YABBY 4-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120656612
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
120656612
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Ortholog
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
120656612
NCBI-ProteinID:
XP_039790704
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All DBs
Position
1N:complement(53003117..53007095)
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AA seq
259 aa
AA seq
DB search
MMSSSSSAAFPLDHLAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLS
VNLRGLLLPPAAPPANQLSFGGGGGHSLLSPTSPHGLLDEFALQTPSLLMDQASANLSNT
ITGRSNSSSCASNNLPAAPPMPAAKPPVQQEPEIPKSAPSVNRPPEKRQRVPSAYNRFIK
DEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKTFKTQDGAEDMLLKDG
LYAAAAAAAAAANMGITPF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtcctcgtcgtcggccgccttcccgctggaccacctcgcgccgtcccccacc
gagcagctctgctacgtgcactgcaactgctgcgacaccatcctcgccgtcggcgtgccg
tgcagcagcttgttcaagacggtgacggtgcgctgcggccactgcgccaacctgctctcc
gtcaacctccgcggcctcctgctcccgcccgcggcaccgcccgccaaccagctcagcttc
ggcggcggcggcggccactccttgctctcccccacatccccgcatggcctcttggacgag
ttcgcgctccagacgccgagcctcctcatggatcaggcgagcgccaacctgagcaacacc
atcactggccgcagcaacagcagcagctgcgccagcaataacctgcccgccgcgccgccg
atgccggcagcgaagccgcccgtgcagcaggagcccgagatacccaagagcgccccgtcg
gtgaacaggcctccggagaagcggcagagagtcccgtcggcgtacaaccggttcatcaag
gacgagatccagcgcatcaaggccggcaacccggacatcacccaccgggaggcgttcagc
gcagccgcaaagaattgggcacatttcccgcacatccatttcggcctcatgccggaccag
ggcctcaagaagaccttcaagactcaggatggcgctgaagacatgcttctcaaggatggc
ctctatgcagcagcggcggcagcggcagcagccgccaacatgggcatcaccccattctag
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integrated database retrieval system
