Panicum virgatum (switchgrass): 120656688
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Entry
120656688 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 8-like
KO
K03355
anaphase-promoting complex subunit 8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120656688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120656688
03036 Chromosome and associated proteins [BR:
pvir03036
]
120656688
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120656688
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120656688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC8
TPR_1
TPR_8
TPR_2
TPR_11
TPR_17
TPR_14
TPR_12
TPR_19
TPR_7
ANAPC3
TPR_CcmH_CycH
ARM_TT21_C
TPR_16
ChAPs
TPR_15
TPR_9
TPR_NPHP3
RPN7
ARM_TT21_4th
TPR_MalT
NSF
Motif
Other DBs
NCBI-GeneID:
120656688
NCBI-ProteinID:
XP_039790806
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All DBs
Position
1N:53889860..53894243
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AA seq
599 aa
AA seq
DB search
MASAKETYRAELRAAARQLGERCLYSAAKWAAELLVGVDMDTAPAPSAAMDTPSSSSAAS
AGRLLHLHRSGGSSFRHRPRPGCGSTSEAGTPLGGVSYVSTPIPDDDAFDSGGDKYLLAK
TYFDCREYRRAAHVLQNQAGRKAVFLRCYALYMAGEKRKEAEMIELEGLLGKSNAVNQEL
VALERELSAHRRTGSIDSFGLYLYGLVLRDKGCEGLARTILVESVNSYPWNWSAWSELQS
LCTSSDILNNLNLKNHWMKEFFLASTYLELKMHEEALKRYERLMGVFRCSGYIQAQIATV
QYSMRDLDEAEMIFEELLGIDPFRVDSMDIYSNLLYAKESLTALSFLAHRVFLTDKYRPE
SCCIIANYYSLKGQHEKSVLYFKRALKLDRKYLSAWTLMGHEYVELKNTPAAIDAYRRAV
DINPRDFRAWYGLGQTYEMMGMPFYALYYFRKSSYLQPNDARLWIAMAQCYESDPLQMIE
EAIKCYERAANCNDTEGIALHQLAKLHGMLGQSEEAAFYYKKDLERMEVEERQGQNFVEA
LLFLAKHYKSIGSFEEAEHYCTRLLDYTGPEKETAKNMLQGIKRLQSGFPSMDIDHFAL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccaaggagacctatcgcgccgagctccgcgccgccgcccgtcagctcggc
gagcgctgcctctactctgccgccaaatgggccgccgagctgctcgtcggcgtagacatg
gacacggccccggccccgtcggccgcgatggacaccccgtcctcctcgtccgcggcctcc
gcagggcggctgttgcacctgcaccgcagcgggggttccagcttccgccaccggccccgc
cccggatgcggcagcacctcggaggctgggaccccgctaggcggcgtgtcgtacgtcagc
acgcccattcccgacgacgacgcgttcgattcgggcggcgacaagtacctgctcgccaag
acctacttcgactgtcgggagtaccgtcgcgccgcccacgtgctgcagaaccaggctggg
cgcaaggctgtgttcctgcgatgctacgcgctctacatggctggagagaagcggaaagag
gcagagatgatagagcttgaaggattgttgggcaagagtaatgctgttaatcaggaacta
gttgctttggagagagaactgtcagcacaccggagaactggttctattgattcatttggg
ctctacttgtatggccttgttcttcgtgataaaggatgcgaaggtctagctaggacaatt
ttggtagaatctgtcaacagctacccgtggaactggagtgcttggtcagagttacaatct
ttatgcaccagcagtgacattctgaataacttaaatttgaagaatcactggatgaaagaa
ttctttcttgccagtacatatctggaactaaagatgcatgaagaagctctgaaaagatat
gagcgcttgatgggggtcttccgctgcagtggctacattcaggctcaaattgcaacggtg
cagtatagtatgagggacctggatgaagcggagatgatttttgaagaactgctcgggatt
gatcctttccgtgtggattctatggatatttactcaaatttactatatgcaaaagaaagc
ttgactgctttgagtttccttgcacacagagtatttttgacagataaataccgcccagaa
tcctgctgcataattgcaaattactacagtctgaagggccagcatgagaaatcagttttg
tactttaaaagggcactaaagctcgatcgaaaatacctctcagcttggacccttatggga
cacgagtatgttgagctgaaaaatactcctgctgcaattgatgcctacagaagagctgtt
gatattaatcctagagatttccgtgcttggtatggtcttggtcaaacctatgagatgatg
gggatgccattttatgcactttattacttccggaaatcatcatatctgcaacccaatgat
gctcgtctctggattgccatggctcagtgttatgaaagtgatccgcttcaaatgattgaa
gaagccatcaagtgctatgagagggctgcaaattgcaatgacactgaaggaatagcactt
catcaactagcaaagttacatggcatgctggggcagtctgaggaagctgcattctactac
aagaaggatttagagagaatggaggttgaggaaaggcaaggccagaattttgttgaagct
ttgcttttccttgctaagcattacaagagcataggcagtttcgaggaagcagaacactat
tgtacaaggctcttggactacactggtcctgagaaggagactgctaaaaatatgttacaa
gggataaaaagattacagtcggggtttccgtcaatggatattgaccattttgcactgtaa
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