KEGG   Panicum virgatum (switchgrass): 120656689
Entry
120656689         CDS       T07260                                 
Name
(RefSeq) chaperone protein dnaJ A6-like
  KO
K09503  DnaJ homolog subfamily A member 2
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120656689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120656689
   03029 Mitochondrial biogenesis [BR:pvir03029]
    120656689
Chaperones and folding catalysts [BR:pvir03110]
 Heat shock proteins
  HSP40 / DNAJ
   120656689
Mitochondrial biogenesis [BR:pvir03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    120656689
SSDB
Motif
Pfam: DnaJ_C DnaJ DnaJ_CXXCXGXG Anti-TRAP Baculo_8kDa
Other DBs
NCBI-GeneID: 120656689
NCBI-ProteinID: XP_039790808
LinkDB
Position
1N:53906755..53910878
AA seq 421 aa
MFGRMPRKSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYE
VLSDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDLFEQLFPGSGTFGGGGSRVRRQKR
GDDVVHTMKVSLEDLYNGTTKKLSLSRSVLCSKCKGKGSKSGASGTCHGCRGVGMRTITR
QIGLGMIQQMNTVCPACKGTGEIISEKDKCSSCKGSKVVEEKKVLEVHVEKGMQHDQKIV
FQGQADEAPDTVTGDIVFVLKLKDHPKFKRKYDDLYVEHTISLTEALCGFQFVLTHLDGR
QLLIKSNPGEVIKPGQHKAINDEGMPQQGRPFMKGRLFVEFNVEFPESGALSPAQCRSLE
KILPPKPGSQLSDTELDQCEETTLHDVNIEEEMRRRQHQKRQEAYYEDEEESGPRVQCAQ
Q
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttggacgcatgccaaggaagagcagcaacaacaccaagtattatgaggttcttggt
gtgtctaagactgcaagccaggatgagctgaagaaagcatacaggaaagctgccataaaa
aaccatcctgacaagggtggtgaccctgagaagtttaaggaattgtctcaagcatatgag
gttcttagcgacccggaaaagagggagatctatgaccagtatggagaagatgcacttaaa
gagggaatgggaggaggcagcagcagtgatttccatagcccgttcgacttatttgagcaa
ctttttccgggttctggcacctttgggggaggtggctcaagagtacgcagacaaaagcgt
ggtgatgatgtggtgcatactatgaaggtttctttagaagatctgtataatgggacaacc
aaaaagctatctttgtcacggagtgttttgtgctcaaagtgcaaggggaaaggatccaag
agtggggcatcaggaacttgccatggttgtcgtggtgttggaatgaggacaatcacaaga
cagataggccttggcatgatccaacagatgaacactgtttgccctgcatgcaaaggaaca
ggtgagatcataagtgagaaggataaatgctcaagctgtaaaggaagcaaggtagtcgag
gagaagaaggtcttggaggttcatgtggagaaaggaatgcagcatgaccagaagattgta
ttccagggtcaagctgacgaagctcctgacacggtgacaggagacattgtttttgtgttg
aaacttaaagaccacccaaagtttaagaggaagtatgatgacttatatgttgagcacaca
atctcccttactgaggctctgtgtggcttccagtttgttctgactcatcttgatggtcgg
cagcttctgataaaatctaatcctggagaggttataaagcctggtcaacacaaggccata
aatgatgagggtatgccccagcaaggtcgccctttcatgaagggccgtctttttgttgaa
ttcaacgtcgagtttcccgagtccggtgccctctcccctgcccaatgccgatcacttgag
aagatccttccaccaaagccagggagccagctgtcggacacggagctggatcagtgcgag
gagaccaccctgcatgatgtcaacattgaagaggagatgaggcgcaggcagcatcagaag
cggcaggaagcgtactatgaagacgaggaagaatctggaccgagggtgcagtgcgcccag
cagtga

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