Panicum virgatum (switchgrass): 120656689
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Entry
120656689 CDS
T07260
Name
(RefSeq) chaperone protein dnaJ A6-like
KO
K09503
DnaJ homolog subfamily A member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120656689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120656689
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120656689
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP40 / DNAJ
120656689
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120656689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ_C
DnaJ
DnaJ_CXXCXGXG
Anti-TRAP
Baculo_8kDa
Motif
Other DBs
NCBI-GeneID:
120656689
NCBI-ProteinID:
XP_039790808
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Position
1N:53906755..53910878
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AA seq
421 aa
AA seq
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MFGRMPRKSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYE
VLSDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDLFEQLFPGSGTFGGGGSRVRRQKR
GDDVVHTMKVSLEDLYNGTTKKLSLSRSVLCSKCKGKGSKSGASGTCHGCRGVGMRTITR
QIGLGMIQQMNTVCPACKGTGEIISEKDKCSSCKGSKVVEEKKVLEVHVEKGMQHDQKIV
FQGQADEAPDTVTGDIVFVLKLKDHPKFKRKYDDLYVEHTISLTEALCGFQFVLTHLDGR
QLLIKSNPGEVIKPGQHKAINDEGMPQQGRPFMKGRLFVEFNVEFPESGALSPAQCRSLE
KILPPKPGSQLSDTELDQCEETTLHDVNIEEEMRRRQHQKRQEAYYEDEEESGPRVQCAQ
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacgcatgccaaggaagagcagcaacaacaccaagtattatgaggttcttggt
gtgtctaagactgcaagccaggatgagctgaagaaagcatacaggaaagctgccataaaa
aaccatcctgacaagggtggtgaccctgagaagtttaaggaattgtctcaagcatatgag
gttcttagcgacccggaaaagagggagatctatgaccagtatggagaagatgcacttaaa
gagggaatgggaggaggcagcagcagtgatttccatagcccgttcgacttatttgagcaa
ctttttccgggttctggcacctttgggggaggtggctcaagagtacgcagacaaaagcgt
ggtgatgatgtggtgcatactatgaaggtttctttagaagatctgtataatgggacaacc
aaaaagctatctttgtcacggagtgttttgtgctcaaagtgcaaggggaaaggatccaag
agtggggcatcaggaacttgccatggttgtcgtggtgttggaatgaggacaatcacaaga
cagataggccttggcatgatccaacagatgaacactgtttgccctgcatgcaaaggaaca
ggtgagatcataagtgagaaggataaatgctcaagctgtaaaggaagcaaggtagtcgag
gagaagaaggtcttggaggttcatgtggagaaaggaatgcagcatgaccagaagattgta
ttccagggtcaagctgacgaagctcctgacacggtgacaggagacattgtttttgtgttg
aaacttaaagaccacccaaagtttaagaggaagtatgatgacttatatgttgagcacaca
atctcccttactgaggctctgtgtggcttccagtttgttctgactcatcttgatggtcgg
cagcttctgataaaatctaatcctggagaggttataaagcctggtcaacacaaggccata
aatgatgagggtatgccccagcaaggtcgccctttcatgaagggccgtctttttgttgaa
ttcaacgtcgagtttcccgagtccggtgccctctcccctgcccaatgccgatcacttgag
aagatccttccaccaaagccagggagccagctgtcggacacggagctggatcagtgcgag
gagaccaccctgcatgatgtcaacattgaagaggagatgaggcgcaggcagcatcagaag
cggcaggaagcgtactatgaagacgaggaagaatctggaccgagggtgcagtgcgcccag
cagtga
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