Panicum virgatum (switchgrass): 120656767
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Entry
120656767 CDS
T07260
Name
(RefSeq) amino acid transporter AVT3B-like
KO
K14209
solute carrier family 36 (proton-coupled amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120656767
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120656767
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
Others
120656767
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC36: Proton-coupled amino acid transporter
120656767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
120656767
NCBI-ProteinID:
XP_039790886
LinkDB
All DBs
Position
1N:55072729..55074903
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AA seq
425 aa
AA seq
DB search
MGFGMGNNGASSSSSRLDPAPLLPHHGSAGGEIGLSSQPKTFANVFIAVVGAGVLGLPYT
FSHTGWAAGSLLLFVVAALTFYCMMLLVACRRRLADEHPKIASFGDLGDAVFGAHGRSAV
DVMLVLSQVSFCIGYLIFISNTMAHLYPIFAPSASALLSPKALFIWAMLPFQLGLNSIKT
LTLLAPLSIFADVVDLGAMGVVLGQDVAAWLAEPPPVVAFGGPAALLYGLGVSVYAFEGV
GMVLPLEAEAANKRKFGVTLGLSMAFIAVMYGLFGVMGYVAFGDATRDIITTNLGAGWLS
AAVQLGLCINLFFTMPVMMNPVYEVAERLLHGKRYCWWLRWLLVVVVGLAAMYVPNFTDF
LALVGSSVCVVLGFVLPASFHLKVFGAEMGWPGVLSDVLLVVLGLALAVFGTYTSLLQIF
HSSSV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgggatggggaataacggggcgagctcgtcgtcgtcgcggctggaccccgcc
ccgctcctgccgcaccatggcagcgcgggcggcgagatcggcctgtcgtcgcagcccaag
acgttcgccaacgtcttcatcgcggtggtcggcgccggcgtgctggggctgccgtacacc
ttctcgcacaccgggtgggcggcggggtcgctgctgctcttcgtcgtcgccgcgctcacc
ttctactgcatgatgctgctcgtcgcgtgccgccgccgcctcgccgacgagcacccgaag
atcgcttcgttcggggacctgggggacgccgtgttcggcgcgcacgggcggtccgccgtg
gacgtgatgctggtgctcagccaagtgagcttctgcatcgggtacctcatcttcatctcc
aacaccatggcgcacctctacccgatattcgcgccgtcggcctccgccctcctctccccc
aaggcgctattcatctgggcgatgctgccgttccagctcgggctcaattccatcaagacg
ctcacgctgctcgcgccgctcagcatcttcgccgacgtcgtggacctcggcgccatgggg
gttgtccttggccaggacgtcgctgcctggctcgccgagcccccacccgtggtcgcgttc
ggcggccctgccgcgctcctctacgggctcggcgtctccgtgtacgcgttcgagggagtc
ggcatggtgctgccgctggaggcggaggcggcgaacaagaggaagttcggcgtcacgctc
gggctgtccatggcgttcatcgccgtcatgtacgggctgttcggcgtgatggggtacgtc
gcgttcggcgacgccacaagggacatcatcaccaccaacctcggcgccgggtggttgtcg
gccgccgtgcagctggggctgtgcatcaacctcttcttcacgatgccggtgatgatgaac
cccgtgtacgaggtcgccgagcgcctgctccacggcaagcgctactgctggtggctccgg
tggctgctcgtcgtcgtcgtcgggctcgccgctatgtacgtgcccaacttcaccgacttc
ctggcgctcgtcgggagcagcgtctgcgtcgtcctcgggttcgtgctgccggcctcgttc
cacctcaaggtgttcggcgccgagatgggctggcccggggtgctctccgacgtcctcctg
gtcgtgctcgggctcgcgctcgccgtgttcgggacgtacacatcgctgctgcaaatcttc
cactcgtccagcgtttga
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