Panicum virgatum (switchgrass): 120656777
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Entry
120656777 CDS
T07260
Name
(RefSeq) probable N6-adenosine-methyltransferase MT-A70-like
KO
K05925
mRNA m6A methyltransferase catalytic subunit [EC:
2.1.1.348
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120656777
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.348 mRNA m6A methyltransferase
120656777
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120656777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MT-A70
Macro
Motif
Other DBs
NCBI-GeneID:
120656777
NCBI-ProteinID:
XP_039790892
LinkDB
All DBs
Position
1N:55261635..55265882
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AA seq
705 aa
AA seq
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MEAQTGAAPGGGDDLATMREQCRTLEESIAARREAQLDLIGSLQHLVPDLVPSLDQSLRL
IAAFNGRPFVPTLYPNASAHAQSHNLKPHHRRALPDPARSTRRKTSPGSSPASAAAGGSG
AVGGIDAVRTMVAVCLLELVPFSEIDAAALARRLQAETSSASEAERAALADLATELGGSA
PAAVALALRRIAEDSGALQIEEAFIGGKQMTMVWAIDRSKLLKELPESASVSQVHPPPTP
QAPPTETDANSAIIPRPPPLQQQEMWGHPMQPMFPRPRGMAMPRMPPGLMPLQRPFMAPG
AVIPMGGPGPSATQLKQRTEEEDLKDLELLLNKKTYREKQNTKTGEELLDLIHRPTAKET
AVAAKFKTKGGSQLKEYCTNLTKEDCRRQTGSFVACDKVHFRRIIAPHTDTNLGDCSFLD
TCRHTKTCKYVHYELDQTPDVPPMMAGALAPPRQIKPQRAEYCSEIELGESQWINCDIRN
FRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRTLNVPALQTDGLIFLWVTGRAMELG
RECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPLVNRNIDTD
VIVAEVRETSRKPDEMYAMLERISPRTRKLELFARMHNTQAGWLSLGNQLNGVRLVDEGL
RARYKAAYPDVEVQPPSPPRTSGPMDVEQTSSQKAAAPDVGERPA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcagaccggcgccgcccccggcggcggcgacgacctcgctaccatgcgcgag
cagtgccggactctggaggagtccatcgcggcccgccgggaggcgcagctcgacctcatc
ggctccctgcagcacctcgtcccggacctggtgccctccctcgaccaatccctccgcctc
atcgccgccttcaacggccgccccttcgtccccacgctctaccccaacgccagcgcccac
gcgcagagccacaacctcaagccccaccaccgccgcgccctccccgacccggcccgctcc
acccgccgcaagacctcgccgggctcctccccggcctctgccgccgcggggggctcgggc
gccgttggcggcatcgacgccgtgcgcaccatggttgccgtgtgcctcctcgagctcgtc
cccttctccgagatcgacgccgccgcgctcgcgcgccgcctgcaggcggagacgtcgtcc
gccagcgaggccgagcgggcggctcttgccgacctcgccacggagcttggaggttccgcg
cctgctgcggttgccctcgcgctccgtcgcatcgcggaagacagcggtgccttgcagatc
gaggaggccttcattggaggaaagcagatgacaatggtctgggccattgaccggagcaaa
ctcctcaaagagctacctgaatccgcctccgtgtcccaagtccaccctccgccaactcca
caggcgcccccgaccgagactgatgctaacagcgccatcataccaaggcctccgccgctg
cagcagcaggaaatgtggggtcacccaatgcaaccgatgttcccacgccccaggggcatg
gcaatgccgaggatgccgccagggttgatgccactgcagcggccattcatggcgccaggg
gcagttatcccaatgggtggcccggggccgagcgctactcagctgaagcagaggacagag
gaggaggaccttaaggatcttgagctgctgctgaacaagaagacatatagagagaagcag
aatacgaagactggagaggagctgctggatctcattcaccggcccacggcaaaggagaca
gctgtcgcggcaaagtttaaaacaaagggtggctcccagttaaaggaatactgcaccaat
ttaactaaggaagattgccgacgccaaacaggttcctttgtggcctgtgataaggtccac
tttcggcgtattattgctccacatactgatacaaacctaggagattgctctttcctggac
acttgccgtcacacaaagacttgcaagtatgtccattacgagcttgatcaaacaccagat
gtacctccaatgatggctggtgcccttgcaccacctagacaaataaagccccagagagct
gaatattgttcagaaatagagctaggagaatctcaatggataaactgtgacatccggaac
ttcaggatggacatcttaggacagtttggagtaattatggctgaccccccctgggatatt
catatggagctgccatatggcacaatggctgatgatgaaatgaggacacttaatgttcca
gctttgcaaactgatggtttgattttcttatgggtgactggtcgtgctatggaacttggg
cgtgaatgtctggagctctggggttacaagcgtgttgaagaaattatctgggtgaagacc
aatcaacttcaacgtatcatccgaactggacgcactggccattggttgaaccacagcaaa
gaacattgtcttgttggaataaaaggaaaccctttagtgaacaggaatatagatactgat
gttattgttgccgaagtccgtgagactagcagaaaacctgatgagatgtacgccatgcta
gagcggataagccctaggacaaggaagctggaactgtttgcaagaatgcataatacacaa
gctggatggctttctctgggtaaccagttaaatggagtaaggcttgtggatgaagggttg
agagcaaggtacaaggctgcttaccctgatgtggaggtccagccgccatcacctcccagg
acgagcgggccgatggatgttgagcaaactagttcgcagaaggctgctgcaccagatgtc
ggtgagaggcctgcctga
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