Panicum virgatum (switchgrass): 120656790
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Entry
120656790 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 49-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120656790
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120656790
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120656790
NCBI-ProteinID:
XP_039790904
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Position
1N:55527202..55529459
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AA seq
562 aa
AA seq
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MSSRAAAAVACGDAAGAGEATLFTAPLLAPEAGEGEMPPPPVLLSRKPRGRLARAVKEAW
SVSLSVTFPMAPSVSVAAAGAEARSILGLALPMILTGLLLYLRSMISMLFLGRLGGLALA
GGSLAIGFANITGYSVLSGLAMGMEPICGQAFGAGHHGLLGVTTQRTVLMLLAAAVPIGG
LWAHMRPLLLLCGQDAGIAAAAETYILASLPDLLLQALLHPVRIYLRAQSINLPLTLCAA
LAIALHLPINYVLVSVLGLGIRGVALASVLANLNLVLFLFAYILIWGVHRRTGGFALSAE
SFRGWGELAGLALPSCVSVCLEWWWYEIMILLCGLLANPQATVASMGILIQTTSLIYIFP
SSLGLGVSTRVSNELGANRPDHAARAATVGLVLGFAFGGVASTFAYLVRGAWAAMFTADP
AIVALTASVLPILGACELGNCPQTAGCGVLRGSARPKDAASINLRSFYLVGTPVALVLAF
WYHYDFQGLWLGLLAAQAACVVRMLLVIGRTDWTAEAKRAQQLAGAGGALEIKDGMEVGA
AGGDDDPGMPIVVVIERPKDQC
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgcgccgccgccgcggtggcgtgcggggatgccgccggcgccggcgaggcg
acgctcttcactgcgcccctgctcgcccccgaggccggggagggagagatgccgccgccc
ccggtgctgctctcgcgcaagccgcggggccggctcgccagggcggtgaaggaagcctgg
tccgtgtccctgtccgtcacattccccatggcgccgtccgtgtcggtggccgcggcgggc
gcggaggcgcgctccatcctgggcctcgcgctgccgatgatcctcacgggcctgctgctc
tacctccgctccatgatctccatgctcttcctcggccgcctcggcgggctcgcgctcgcc
ggggggtccctcgccatcggcttcgccaacatcacggggtactccgtgctgtcgggcctc
gccatggggatggagcccatctgcgggcaggccttcggcgcgggccaccacgggctcctc
ggcgtcaccacgcagcgcaccgtgctgatgctcctcgccgccgccgtgcccatcggcggg
ctctgggcgcacatgcggcccctgctcctgctctgcggccaggacgccggcatcgccgcg
gccgccgagacctacattctcgcctccctcccggacctgctcctccaggcgctcctccac
cccgtccgcatctacctccgggcgcagtccatcaacctgcctctcaccctctgcgctgcg
ctcgccatcgcgctccacctgcccatcaactacgtgctcgtctccgtcctcgggctcggc
atccgcggggtggcattggcctccgtgctggccaacctgaacctcgtcctcttcctcttc
gcctacatcctgatctggggcgtgcaccggcgcaccggcggcttcgcgctctccgccgag
agcttccgcggctggggcgagctcgccggcctcgcgctgccgagctgcgtcagcgtctgc
ctcgagtggtggtggtacgagatcatgatcctgctgtgcggcctgctcgccaacccgcag
gcgacggtggccagcatgggcatcctcatccagaccacgtcgctcatctacatcttccct
tcctcgctcggcttgggcgtctcgacgcgcgtcagcaacgagctcggcgcgaaccgcccg
gaccacgcggcccgcgcggcgacggtcggcctcgtgctcgggttcgcgttcggcggcgtg
gcgtccacgttcgcgtacctcgtgcggggcgcctgggcggccatgttcacggccgacccg
gcgatcgtcgcgctcaccgcgtccgtgctgcccatcctgggcgcctgcgagctcggcaac
tgcccgcagaccgccggctgcggcgtgctgcggggcagcgcgcggcccaaggacgccgcc
agcatcaacctccgctccttctacttggtgggcacgcccgtggcgctcgtcctcgccttc
tggtaccactacgacttccagggcctgtggctcggcctcctcgcggcgcaggcggcctgc
gtcgtgcgcatgctgctggtgatcggccggacggattggaccgccgaggccaagcgcgcg
cagcagctcgccggagcaggaggcgcgctggagatcaaagacggcatggaagttggagcg
gccgggggagacgacgacccgggcatgcctatcgtcgtagtgatcgagcgaccaaaggat
cagtgctga
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