KEGG   Panicum virgatum (switchgrass): 120656816
Entry
120656816         CDS       T07260                                 
Name
(RefSeq) brassinosteroid-responsive RING protein 1-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120656816
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120656816
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 Zn_ribbon_FGT1_2 Prok-RING_4 zf-RING_4 RINGv DUF1272 PHD_NSD
Other DBs
NCBI-GeneID: 120656816
NCBI-ProteinID: XP_039790933
LinkDB
Position
1N:complement(56035012..56036475)
AA seq 174 aa
MGFPLVSYVLAVPKPVVVFCKMLSVIRDAFLLMLAVLGLCPFPYDDGSPRRADGPKPEEV
KGRLPAVEYGELVAERLVVASPGGGGHAACRGEEDAAAAAAVASPTCIVCLENVEAGHEV
RRLGNCAHAFHRGCIDRWIDLGRATCPLCRSDLLPRPRGRARLGRLASLLTRVW
NT seq 525 nt   +upstreamnt  +downstreamnt
atggggttcccgctggtgagctacgtcctcgccgtgcccaagccggtcgtcgtcttctgc
aagatgctcagcgtcatcagggacgccttcctgctgatgctcgccgtcctggggctctgc
cccttcccgtacgacgacggctcgccccgccgggcggacgggccgaagccagaggaggtg
aagggccggctccccgccgtggagtacggcgagctcgtggccgagcggctggtggtggcg
tccccgggcggcggcgggcacgcggcgtgccgcggcgaggaggacgcggcggcggcggcg
gcggtggcctcgccgacgtgcatcgtgtgcctggagaatgtggaggcggggcacgaggtg
cggcggctgggcaactgcgcgcacgccttccaccgcggctgcatcgaccggtggatcgac
ctcgggcgggcgacgtgcccgctgtgccggtccgacctgctgccgcgcccgcggggccgg
gcccggctgggccggctcgccagcctcctcacgcgcgtttggtga

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