Panicum virgatum (switchgrass): 120656845
Help
Entry
120656845 CDS
T07260
Name
(RefSeq) BOI-related E3 ubiquitin-protein ligase 1-like
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120656845
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120656845
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120656845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
zf-RING_2
DUF4420
zf-C3HC4
MUN
Hexokinase_1
YqeC
Motif
Other DBs
NCBI-GeneID:
120656845
NCBI-ProteinID:
XP_039790969
LinkDB
All DBs
Position
1N:complement(56302278..56304318)
Genome browser
AA seq
348 aa
AA seq
DB search
MAVQAQYPSNLLFHDRGEPERKEMDMPRPPQLAGVSPAAVYFSSGGASGNRRKRPREPMA
PPPPAAKEEYVNLFTLQPQQSTSFANMARFQSQNRVLSSPSPAATALVSTGLRLAFDEQQ
QQQQQQQQQESKQMMNVLRHSSSQSLFASVSDELAAQVKQHDDEIDRFIREQGEQLRRAM
ADRLRRHNRAILVKADQSAARRLREKAAEAEREARRGAELEERLVRLRGEAAAWQARALS
EQAAAVTLHAQLQQAAAAARASVEELAAAGDAGPVESSSSAYVDPRRTGPSSDRACLVCR
LRPASVVLLPCRHLSLCGECFAAGDADAAMACPVCLCVRTGSVEAILC
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacaggcgcagtacccgtccaatctcctcttccacgacagaggtgagccggag
aggaaggagatggacatgcccaggccgccgcagctcgccggagtatcgccggcggcagtc
tacttctccagcggtggagcgagtgggaatcggaggaagcggcccagggagcccatggcg
ccgccgccgccggcggccaaggaggagtacgtcaatctgttcacactccagccgcagcag
tcgacgtcgtttgcgaacatggcgcgcttccagagccagaacagggtcttgtcgtccccg
tctcccgccgcgaccgcgctcgtgtcgactggcctccgcctggcattcgacgagcagcag
cagcagcaacaacaacaacaacaacaggagagcaaacagatgatgaatgtcctgcgccac
tcgtcgtcgcaatcgctgttcgcctcagtctccgacgagcttgccgcgcaggtgaagcag
catgatgacgagatcgaccggttcatccgggagcagggcgagcagctcaggcgggcgatg
gccgatcggctgcggcgccacaaccgggcgattctggtcaaggcagaccagtccgccgcg
cgccggctccgggagaaggcggcggaagcggagcgcgaggcgcggcgcggcgccgagctg
gaggagcggctcgtccgcctccgtggcgaggcggcggcgtggcaggcgagggcgctgtcg
gagcaggccgccgcggtcaccctgcacgcccagctccagcaggccgcggccgcggcgcgt
gcgtcggtcgaggagctcgccgccgcgggcgacgcgggccccgtggagtcctcgtcgtcg
gcgtacgtggacccccgccgcacggggccgtcgtcggaccgcgcgtgcctcgtctgccgc
ctcaggccggcctccgtggtgctcctcccctgcaggcacctctccctgtgcggcgagtgc
ttcgccgccggcgacgcggacgccgccatggcgtgcccggtgtgcctgtgcgtgcgcacg
gggagcgtggaggccatcctctgttga
DBGET
integrated database retrieval system
