Panicum virgatum (switchgrass): 120656879
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Entry
120656879 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RNF14-like isoform X1
KO
K11971
E3 ubiquitin-protein ligase RNF14 [EC:
2.3.2.31
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120656879
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120656879
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120656879
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RWD
Motif
Other DBs
NCBI-GeneID:
120656879
NCBI-ProteinID:
XP_039791015
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All DBs
Position
1N:56847171..56854397
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AA seq
305 aa
AA seq
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MSSGASSSSSAPRAEAGDGYWAAREEAAARLEAMAARPLGEDELSAEQLETNNQLQEDEV
LALQAIYGDDMVNLEDKAGLRSFEIFVWYPVPNGSKVLLSFRPNGTMIGTDNDGSQDVGE
LFYACRLKHLPPVVLTCLLPRSYPSTCAPYFTISAKWLDEPKVSYLCTMLDEIWTELPGQ
EVVYRWVDWLNSSSWSCISLNDSIVLVPDATSDVVDERAIAGKVLVDSTIPLMQDYDENR
SQEIFLKSLLECGICLSENTGVMLLAWGLAMMFNAKTIFSPSALCAKNDAMWGRSVLVQQ
RKLAF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggggcctcgtcatcgtcctcggcgccgcgggcggaggccggggacggatat
tgggcggcgcgggaagaggcggcggcgcggctagaggcgatggccgcgaggcctcttggg
gaggacgaactctcggcggagcagttggagaccaacaaccagctccaggaggacgaggtg
ttggcactgcaagctatttatggggatgatatggtcaacttggaggataaggcggggctt
cgctcttttgagatttttgtctggtatccagttcctaatggcagtaaggtcttattgagt
tttcgtccaaacggaactatgattggaactgataatgatgggagccaagatgttggtgaa
ctcttttatgcttgcaggttaaagcatttgccacctgtggtgttaacatgtttgctgccg
cgttcatatcccagtacatgtgctccttattttactatatcagccaagtggttggatgaa
ccaaaagtttcatacctctgtaccatgttggatgagatttggactgagcttccagggcaa
gaagtagtgtatagatgggtggactggctgaatagctcttcatggtcgtgcatttctttg
aacgacagcatagtattagtcccagatgcaacttcagatgttgtagatgaacgtgctatt
gcaggaaaagttctcgttgattctactattcctctgatgcaagattacgatgagaataga
tctcaggaaatatttctgaaaagcctacttgagtgtggaatttgtcttagtgaaaacact
ggtgtgatgctgcttgcttgggggttggcaatgatgttcaatgccaagactattttttca
ccttctgctctttgtgcaaagaacgacgccatgtggggaaggagtgtattagtccagcag
agaaaattagcattttga
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