Panicum virgatum (switchgrass): 120656908
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Entry
120656908 CDS
T07260
Name
(RefSeq) protein NRT1/ PTR FAMILY 8.3-like
KO
K14638
solute carrier family 15 (peptide/histidine transporter), member 3/4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120656908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120656908
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC15: Proton oligopeptide cotransporter
120656908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
120656908
NCBI-ProteinID:
XP_039791068
LinkDB
All DBs
Position
1N:57151647..57161339
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AA seq
634 aa
AA seq
DB search
MDAGDAMERGERTRLRPKLLALPSGLGRSPSMGTPRHLTLTPHTPSRSTPRRRTPRTPDR
LRWTIGARSPVPGGTEKFSPLQGHRPDPQDDSLQVPLLNEKECTGSKAPMVVLGFECLES
TAFNGISTNLVMYMETVLHGSNLASASNVTMWFGTSYLTPIFGAIIADAFWGNYNTILVS
LTIYLLGMILVTFSAFMPAATVLAASSVFSAQTVAFVGLYLVAIGSGGVRSSLLPFGAEQ
FDDDNATDRESKGSFFSWFYLCVDFGPIVSGLFIVWIQEKVSWGLGFGISTACLALAFAA
FVLATPMYRPVSGHVQAITKAQSIVSLRAPEFAGTALPMYKLPVPTDKEPADAGTLCDDG
DKVDIICESADLKDIPEEAGSSWSLRTMLQGEELKILLRLLPIWVTSIVMSSAYTQMNTT
FIQQGNAMNVSILSVKVPAASMGSFEVVCVLTWVLLYSKAIVPALRESGFSFGGSGEPTQ
LQRMGAGLLLMALAMAISALVEMKRLGSAARGEEITIAWQIPQYFFLAGAEVFCYIAQLE
FFYAEAPETMKSTCTSLALLTIALGSFLSSSIYAIVAAFTATGGSAGWISDNLNQGHLDY
FFWAMAAMCTLNFFVYTAFAKNYKLKNQDSVLMT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggggacgccatggagaggggcgagcgcacgcggctccggcccaagctgctc
gctcttccatcaggcctcgggcgctcaccgtccatgggcactccacgccacctgacactg
acgccccacacaccgtccaggagcactccacgccggcggacgccccgcacgccggatcgg
ctacgatggacgattggagcgaggagcccagtaccaggaggcacggaaaagttttctcca
ttgcagggtcacaggccagatcctcaggacgatagcttgcaagtgccgctcctgaatgaa
aaagaatgcaccggcagcaaggcgccaatggtagttctcgggttcgagtgcttggagagc
acagcgttcaatggcatctcgacgaacttggtgatgtacatggagaccgtcctccacggc
agcaacctggccagcgcctccaacgtcacgatgtggtttggcaccagctacctgacgccg
atcttcggcgccatcatcgccgacgccttctggggcaactacaacaccatcctcgtatcc
ctcaccatctaccttcttggaatgatcctggtgaccttctccgcattcatgccggcagcc
acggtgctcgctgcctcctcggtgttcagcgcgcagaccgtagcgttcgtggggctgtac
ctcgtcgcgatcgggagcggcggtgtgcggtcgtcgctgctgccgttcggcgcggagcag
ttcgatgacgacaacgcgaccgaccgggagagcaaggggtccttcttcagctggttctac
ctctgcgtcgacttcggcccgatcgtctctggtctcttcatcgtgtggatccaggagaaa
gtcagctggggcctcggcttcggcatttccaccgcctgcctcgcgctcgccttcgccgcc
ttcgtgctcgccacgcccatgtacaggcccgtatctgggcacgtgcaggccatcaccaag
gcccaatccattgtttcgctcagggcccccgaatttgccggtacggccctgcccatgtac
aagctccccgtgcccacggacaaggaacccgccgacgctggcacgctctgcgatgacggc
gacaaggtggacatcatctgcgagtcggcggacttgaaggatataccggaggaggcgggc
tcgtcgtggagtctccgcaccatgctgcagggggaggagctcaagatcctgctgcggcta
ctgcccatctgggtcaccagcatcgtcatgtcctcggcgtacacgcagatgaacaccacc
ttcatccagcagggcaacgccatgaacgtgtccatcctgtcggtgaaggtgccggcggcg
tcgatgggctcatttgaggtggtctgcgtcctgacatgggtgctgctttacagcaaggcg
atcgtgccggcgctgagggaaagcggattctcgttcggcggcagcggcgagccgacgcag
ctgcagcgcatgggcgccggcctgctcctcatggctctagcaatggcgatctcggcgctc
gtggagatgaagcggctcggcagcgcggcgcgcggcgaggagatcaccatcgcgtggcag
atcccgcagtacttcttcctggcgggcgcggaggtgttctgctacatcgcgcagctggag
ttcttctacgccgaggcgccggagaccatgaagagcacgtgcacgtcgctggcgctgctc
accatcgcgctgggcagcttcctgagctcgtccatctatgccatcgtggcggcgttcacg
gccacggggggtagtgcagggtggatctccgacaacctcaaccagggacacctcgactac
ttcttctgggccatggccgccatgtgcacactcaacttcttcgtgtacaccgccttcgcc
aagaactacaagctgaagaatcaagactccgttctcatgacatga
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