KEGG   Panicum virgatum (switchgrass): 120656930
Entry
120656930         CDS       T07260                                 
Name
(RefSeq) 3-dehydrosphinganine reductase TSC10A-like
  KO
K04708  3-dehydrosphinganine reductase [EC:1.1.1.102]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00600  Sphingolipid metabolism
pvir01100  Metabolic pathways
pvir04382  Cornified envelope formation
Module
pvir_M00094  Ceramide biosynthesis
pvir_M00099  Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    120656930
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120656930
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.102  3-dehydrosphinganine reductase
     120656930
SSDB
Motif
Pfam: adh_short adh_short_C2 KR Epimerase GDP_Man_Dehyd Eno-Rase_NADH_b NmrA Polysacc_synt_2 NAD_binding_10 NAD_binding_7 PALP 3Beta_HSD RmlD_sub_bind THF_DHG_CYH_C
Other DBs
NCBI-GeneID: 120656930
NCBI-ProteinID: XP_039791101
LinkDB
Position
1N:57377089..57379523
AA seq 326 aa
MAAALLLLLVPPVGLLAALAFLARPRAARVPLKGRHVLITGGSSGIGLAMATAAAREGAR
VSILARNLARLEEARAAIQRESGRGDVGVHAADVRDADAVARALREAGPVDVLVCNHGVF
VPQELERQDMEEIKWMVDINLMGTFHLIKAALPAMKARTRETRLPGSIAIMSSQAGQVGV
YGYTAYSASKFALRGLGEALQHEVIMDNIHVSLIFPPDTETPGFEEEQKRRPELTNIIAA
SSGGMKANDVAKKALDGIKSGKFIVPCNFDGAMLAIATAGLSPQSSPVMAFLEVIGAGLM
RFVALCFQWNWFSTIESYYAKNKKRE
NT seq 981 nt   +upstreamnt  +downstreamnt
atggccgcggcgctcctcctcctgctggtcccgcccgtcggcctcctcgccgcgctcgcc
ttcctggcgcgcccccgcgccgcgcgcgtcccgctcaaaggccgccacgtcctcatcacg
ggcgggtccagcggcatcgggctcgccatggccacggccgcggcgcgggagggcgcgcgg
gtctccatcctggcccgcaacctcgcccgcctcgaggaggcgcgcgccgccatccagcgc
gagtccggccgcggcgacgtcggcgtccacgcggccgacgtgcgggacgcggacgccgtg
gcgcgcgcgctccgggaggccgggcccgtcgacgtgctggtctgcaaccacggcgtgttc
gtgccgcaggagctcgagcggcaggacatggaggagatcaagtggatggtggacatcaac
ctcatgggcaccttccacctcatcaaagccgcgctccccgccatgaaggcgcgcacccgc
gagacgcgcctccctgggtccatcgcgatcatgtcctcgcaggccggccaggttggtgtc
tatgggtacactgcgtactcagcgagcaagtttgcgcttcggggattgggggaggcgctg
cagcatgaggtcattatggacaacattcatgtctcgctgatcttccctcctgacactgag
actccaggtttcgaagaggagcagaagaggaggccagaattgacgaatatcatcgcggct
tcatcaggtggaatgaaggccaatgatgttgcaaagaaggctctggacggcatcaaatcc
gggaagtttattgtcccctgcaactttgacggcgcaatgttggctatagccactgctggt
ttatccccacagagctcccctgtaatggcattcctagaggtgattggtgctggactcatg
aggtttgtagcgctttgtttccagtggaattggttttctaccatagagagctactatgcc
aagaacaagaagcgcgagtga

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