KEGG   Panicum virgatum (switchgrass): 120656942
Entry
120656942         CDS       T07260                                 
Name
(RefSeq) 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like
  KO
K09840  9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00906  Carotenoid biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Module
pvir_M00372  Abscisic acid biosynthesis, plants, 9'-cis-neoxanthin/9-cis-violaxanthin => abscisic acid
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    120656942
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.51  9-cis-epoxycarotenoid dioxygenase
     120656942
SSDB
Motif
Pfam: RPE65
Other DBs
NCBI-GeneID: 120656942
NCBI-ProteinID: XP_039791118
LinkDB
Position
1N:complement(57509247..57511577)
AA seq 636 aa
MERTLITSNLSMAAHPSRSSGRVGYISPAASAAAQNSSYRKKKSTPSAAATATVVTSPPA
TDNAQSTAPKQTEQQDKGERVAAETNTSRISTASARTRAPSQARAQPRRRPAPAAASLPM
AFCSALEEAINTFVDPPALRPSVDPRNVLSANFAPVDELPPTPCPVVRGAIPRCLAGGAY
IRNGPNPQHLPRGPHHLFDGDGMLHSLLLPTADSPSSDPVLCSRYVQTYKYLVERDAGAP
VMPSVFSGFHGLGGLARGAVVAARVLTGQMNPAEGVGLANTSLVFFGGRLYALGESDLPY
AVRVDPTTGEVTTHGRCDFGGRLFMGMTAHPKKDPVTGEVFAFRYGPVPPFVTYFRFDPA
GNKGPDVPIFSVQQPTFLHDFAVTERYAIFPEIQIMMQPMGMVAGGAPVGADSGKVPRIG
VLPKYATDESDMRWFEVPGFNIMHTLNAWEEADGEELVLVAPNILSVEHALERMELVHAC
VEKVRVNLRTGAVSRTPLSAGNLDFGVIHPGYLGRRNRYGYFGIGDPMPKIGGVAKLDLE
RVGTGDCTVARRDFGAGCFAGEPFFVPDDVEGDGNEDDGYVVCYVHNERTGENRFVVMDA
RSPQLDIVAEVELPARVPYGFHGLFVTKAELQAQQQ
NT seq 1911 nt   +upstreamnt  +downstreamnt
atggagagaacactgatcacctctaacctctccatggctgcgcatccttcaagatcgtcc
gggagagttggctacatctcccctgctgcctctgctgctgcacagaactccagctacagg
aagaagaagagcaccccgtcggccgccgcaaccgccaccgtcgtcacctcccctccggcc
actgacaatgctcagtccactgctccgaagcagaccgagcaacaggacaagggagagcgc
gtggcggccgagactaacacttcaagaattagcactgcaagtgcaagaacaagggcgccg
agccaggcccgggctcagccccgccgccgccctgccccggcggccgcgtccctgccgatg
gcgttctgcagcgcgctggaggaggcgatcaacacgttcgtcgacccgccggcgctgcgg
ccgtcggtggacccgcggaacgtgctgtcggccaacttcgcgcccgtggacgagctgcca
cccacgccctgccccgtcgtgcgcggcgccatcccgcgctgcctcgccggaggggcctac
atccgcaacgggcccaacccgcagcacctcccgcgcgggccgcaccacctcttcgacggc
gacggcatgctgcactcgctgctcctcccgacggcggactcgccgtcgtccgaccccgtc
ctgtgctcgcggtacgtgcagacttacaagtacctcgtggagcgcgacgcgggcgcgccc
gtcatgccgagcgtcttctccggcttccacggcttgggcgggctggcgcgcggcgccgtc
gtggcggccagggtgctcacggggcagatgaacccggccgagggcgtggggctcgccaac
accagcctcgtcttcttcggcgggcgcctctacgcgctcggcgagtccgacctgccgtac
gccgtgcgcgtcgacccgaccaccggcgaggtgaccacgcacggccggtgcgacttcggc
ggccgcctcttcatgggcatgaccgcgcaccccaagaaagatcccgtcactggcgaggtg
ttcgcgttccgctacggtcccgtgccgccgttcgtcacctacttccggttcgacccggcc
gggaacaagggccccgacgtgcccatcttctccgtgcagcagccgacgttcctgcacgac
ttcgccgtcaccgagcggtacgccatcttcccggagatccagatcatgatgcagcccatg
ggcatggtggccggcggcgcgcccgtcggggctgactccggcaaggtgccccggatcggc
gtgctccccaagtacgccacggacgagtcggatatgcgctggttcgaggtgccgggcttc
aacatcatgcacacgctcaacgcgtgggaggaggccgacggcgaggagctggtgctggtg
gcacccaacatcctgtccgtggagcacgcgctggagcgcatggagctcgtgcacgcctgc
gtcgagaaggtgcgcgtcaacctccgcaccggcgccgtgtcgcgcaccccgctctcggcg
gggaacctcgacttcggcgtcatccacccgggctacctcggccggcgtaaccggtacggg
tacttcggcatcggcgaccccatgcccaagatcggcggcgtggccaagctggacttggag
cgcgtcggcacgggcgactgcaccgtggcgcggcgggacttcggggccgggtgcttcgcc
ggggagcccttcttcgtccccgacgacgtggagggggacggcaacgaggacgacggctac
gtggtgtgctacgtccacaacgagcgcaccggcgagaaccggttcgtggtgatggacgcg
aggtcgccgcagctggacatcgtcgccgaggtggagctgcccgcccgcgtcccctacggc
ttccacggcctctttgtcacgaaggccgagctccaggcgcagcagcaatga

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